RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ZIC1Q15915 447 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 CYP2A13Q16696 494 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 HECTD2Q5U5R9 776 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 PRAMEF17Q5VTA0 474 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 FAM199XQ6PEV8 388 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 BORAQ6PGQ7 559 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 PIWIL4Q7Z3Z4 852 aaKnown RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 STRA8Q7Z7C7 330 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 CCDC25Q86WR0 208 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 MCATQ8IVS2 390 aaKnown RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 FLVCR1-AS1Q8TAF5 88 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 EEF1AKMT1Q8WVE0 214 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 ASB11Q8WXH4 323 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 TTC9Q92623 222 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 PKP4Q99569 1192 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 C17orf62Q9BQA9 187 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 DPH2Q9BQC3 489 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 NDC1Q9BTX1 674 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 TRIM54Q9BYV2 358 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 MRPS30Q9NP92 439 aaKnown RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 EURLQ9NYK6 297 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 GPN3Q9UHW5 284 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 SRPK3Q9UPE1 567 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 MYO1CO00159 1063 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 ZSCAN9O15535 394 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 CREG1O75629 220 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 SFTPCP11686 197 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 GABRB3P28472 473 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 GRIA3P42263 894 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 CCR10P46092 362 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 CDC20Q12834 499 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 GPS2Q13227 327 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 ERV3-1Q14264 604 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 TBR1Q16650 682 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 TCTE1Q5JU00 501 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 RBM20Q5T481 1227 aaKnown RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 PAQR3Q6TCH7 311 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 ZNF572Q7Z3I7 529 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 DSELQ8IZU8 1212 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 DNAJC22Q8N4W6 341 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 TTC29Q8NA56 475 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 DLG3Q92796 817 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 LINGO1Q96FE5 620 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 TWSG1Q9GZX9 223 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 SPRTNQ9H040 489 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 FARSAQ9Y285 508 aaKnown RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 MRPS18BQ9Y676 258 aaKnown RBP13.14□□□□□ -0.31
CNOT1-206ENST00000564557 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
CNOT1-206ENST00000564557 CDC14CA4D256 554 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 KRT87PA6NCN2 255 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 GFYI3L273 518 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 TP73O15350 636 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SLC16A5O15375 505 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SLC16A8O95907 504 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 ALAS2P22557 587 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 F8A1P23610 371 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PSMB5P28074 263 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PTPN4P29074 926 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 ARSFP54793 590 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 CDKN2DP55273 166 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SP140Q13342 867 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 LY6DQ14210 128 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 FASTKQ14296 549 aaKnown RBP13.13□□□□□ -0.31
CNOT1-206ENST00000564557 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 CRTC2Q53ET0 693 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SUSD1Q6UWL2 747 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 CYHR1Q6ZMK1 362 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 ADCK2Q7Z695 626 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SLC38A9Q8NBW4 561 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 KIF18AQ8NI77 898 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 CCDC138Q96M89 665 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SELENOSQ9BQE4 189 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
CNOT1-206ENST00000564557 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PARVBQ9HBI1 364 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PCMTD2Q9NV79 361 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 GRHL1Q9NZI5 618 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 NDOR1Q9UHB4 597 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 SNX7Q9UNH6 387 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 POLHQ9Y253 713 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PADI2Q9Y2J8 665 aa13.13□□□□□ -0.31
CNOT1-206ENST00000564557 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms