RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CSTF2P33240 577 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBR1-205ENST00000564540 KRT2P35908 639 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 MAPK12P53778 367 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 HSPB3Q12988 150 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 TAF1BQ53T94 588 aaPredicted RBP4.04□□□□□ -1.76
UBR1-205ENST00000564540 LCN1P1Q5VSP4 162 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 SPINK14Q6IE38 97 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 UGT3A1Q6NUS8 523 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 PAQR6Q6TCH4 344 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 DNAAF5Q86Y56 855 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 GCNAQ96QF7 691 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 CCDC3Q9BQI4 270 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 LRRC61Q9BV99 259 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 MRPL1Q9BYD6 325 aaKnown RBP4.04□□□□□ -1.76
UBR1-205ENST00000564540 NUDT4Q9NZJ9 180 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 THEGQ9P2T0 379 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 KLK13Q9UKR3 277 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 COL5A2P05997 1499 aaPredicted RBP4.04□□□□□ -1.76
UBR1-205ENST00000564540 A0A1W2PPM1 405 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 NEMP2A6NFY4 417 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 KPNA7A9QM74 516 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 AHCYL1O43865 530 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 EIF5BO60841 1220 aaKnown RBP4.03□□□□□ -1.76
UBR1-205ENST00000564540 ACADSP16219 412 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 SHC1P29353 583 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 ZNF239Q16600 458 aaKnown RBP4.03□□□□□ -1.76
UBR1-205ENST00000564540 GLIPR1L2Q4G1C9 344 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 TCTEX1D4Q5JR98 221 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 SLC35D3Q5M8T2 416 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 C6orf163Q5TEZ5 329 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 SPATA1Q5VX52 437 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 MFSD12Q6NUT3 480 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 MZT2BQ6NZ67 158 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 OR6S1Q8NH40 331 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 APOBEC4Q8WW27 367 aaKnown RBP4.03□□□□□ -1.76
UBR1-205ENST00000564540 ZNF830Q96NB3 372 aaPredicted RBP4.03□□□□□ -1.76
UBR1-205ENST00000564540 SEPHS2Q99611 448 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 KLHL4Q9C0H6 718 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 HAO2Q9NYQ3 351 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 RNF150Q9ULK6 438 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 PPIEQ9UNP9 301 aaKnown RBP4.03□□□□□ -1.76
UBR1-205ENST00000564540 MOB4Q9Y3A3 225 aa4.03□□□□□ -1.76
UBR1-205ENST00000564540 SOCS3O14543 225 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 FPGTO14772 594 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 ADAM20O43506 726 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 TRUB2O95900 331 aaKnown RBP4.02□□□□□ -1.77
UBR1-205ENST00000564540 SLC2A2P11168 524 aaPredicted RBP4.02□□□□□ -1.77
UBR1-205ENST00000564540 CCR10P46092 362 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 ZNF75DP51815 510 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 GSCP56915 257 aaPredicted RBP4.02□□□□□ -1.77
UBR1-205ENST00000564540 HUNKP57058 714 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 CSNK2BP67870 215 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 NFATC2Q13469 925 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 ZNF343Q6P1L6 599 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 SUSD1Q6UWL2 747 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 G2E3Q7L622 706 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 P2RY8Q86VZ1 359 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 SPAG16Q8N0X2 631 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 PRSS33Q8NF86 280 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 GATAD1Q8WUU5 269 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 DGAT2Q96PD7 388 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 WWTR1Q9GZV5 400 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 TRPV4Q9HBA0 871 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 OLAHQ9NV23 265 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 STK26Q9P289 416 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 CPSF2Q9P2I0 782 aaKnown RBP4.02□□□□□ -1.77
UBR1-205ENST00000564540 CHORDC1Q9UHD1 332 aaPredicted RBP4.02□□□□□ -1.77
UBR1-205ENST00000564540 RPS6KA6Q9UK32 745 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 SNX8Q9Y5X2 465 aa4.02□□□□□ -1.77
UBR1-205ENST00000564540 A0A1W2PPQ1 181 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 EPM2AB3EWF7 344 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 ARPC2O15144 300 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 VTNP04004 478 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 LINGO3P0C6S8 592 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 PRKACGP22612 351 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 HOXC13P31276 330 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 PTGER4P35408 488 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 MTHFRP42898 656 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 GUCY2DQ02846 1103 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 IL11RAQ14626 422 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 MTF1Q14872 753 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 EXT1Q16394 746 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 MCMDC2Q4G0Z9 681 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 FAM198BQ6UWH4 519 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 GPRIN3Q6ZVF9 776 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 ADGRA1Q86SQ6 560 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 SYT2Q8N9I0 419 aaPredicted RBP4.01□□□□□ -1.77
UBR1-205ENST00000564540 MAPK15Q8TD08 544 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 GTF3AQ92664 365 aaKnown RBP4.01□□□□□ -1.77
UBR1-205ENST00000564540 CCDC106Q9BWC9 280 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 CCDC68Q9H2F9 335 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 TLE6Q9H808 572 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 NSMCE4AQ9NXX6 385 aa4.01□□□□□ -1.77
UBR1-205ENST00000564540 MAGED1Q9Y5V3 778 aaPredicted RBP4.01□□□□□ -1.77
UBR1-205ENST00000564540 SNURFLB1AK76 121 aa4□□□□□ -1.77
UBR1-205ENST00000564540 TRIM77I1YAP6 450 aa4□□□□□ -1.77
UBR1-205ENST00000564540 IDH3BO43837 385 aa4□□□□□ -1.77
UBR1-205ENST00000564540 RAB40ALP0C0E4 278 aa4□□□□□ -1.77
UBR1-205ENST00000564540 LIG4P49917 911 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms