RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 GRID2O43424 1007 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PSIP1O75475 530 aaKnown RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 STK16O75716 305 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PIAS2O75928 621 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 DNAJC8O75937 253 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 GUCA1CO95843 209 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 HOXC4P09017 264 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 EPB42P16452 691 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 HNRNPA2B1P22626 353 aaKnown RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 NUDT1P36639 197 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 SCTRP47872 440 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 CTSCP53634 463 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 ACTN3Q08043 901 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 TUBB3Q13509 450 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 GTF2H2Q13888 395 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 IRF4Q15306 451 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 TCEA2Q15560 299 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PHKG1Q16816 387 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 SOWAHCQ53LP3 525 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 KANK2Q63ZY3 851 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 GTF2H2CQ6P1K8 395 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 UNC5DQ6UXZ4 953 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 GPRIN3Q6ZVF9 776 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 MAVSQ7Z434 540 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 IQCHQ86VS3 1027 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 AMZ2Q86W34 360 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 SFTPA2Q8IWL1 248 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PELI3Q8N2H9 469 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 OXR1Q8N573 874 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 TP53I13Q8NBR0 393 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PHC3Q8NDX5 983 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 TRPC4APQ8TEL6 797 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 ATP6V1E2Q96A05 226 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 CMTM5Q96DZ9 223 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 C19orf60Q96EN9 201 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 CCDC138Q96M89 665 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 LENG8Q96PV6 779 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 NUF2Q9BZD4 464 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 SEMA4BQ9NPR2 832 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 LNPEPQ9UIQ6 1025 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 ADAMTS6Q9UKP5 1117 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 PDE10AQ9Y233 779 aa9.47□□□□□ -0.89
UBFD1-203ENST00000564106 GCN1Q92616 2671 aaKnown RBP9.47□□□□□ -0.89
UBFD1-203ENST00000564106 H0YHG0 523 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 UBFD1O14562 309 aaKnown RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 FPGTO14772 594 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 DFNA5O60443 496 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 CCNT2O60583 730 aaKnown RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SKAP2O75563 359 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 EBLN1P0CF75 366 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 PCSK2P16519 638 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ZNF8P17098 575 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 NCF2P19878 526 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ACP1P24666 158 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 PRDX6P30041 224 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ARL1P40616 181 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ARRB1P49407 418 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 CCNG1P51959 295 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 CDH13P55290 713 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SH3BP2P78314 561 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 COL9A2Q14055 689 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 INPP5AQ14642 412 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SLC9B1Q4ZJI4 515 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 NXNQ6DKJ4 435 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ATG14Q6ZNE5 492 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 RNF165Q6ZSG1 346 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 PDZD3Q86UT5 571 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 BEND7Q8N7W2 519 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ZNF548Q8NEK5 533 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 OR4C6Q8NH72 309 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 TWIST2Q8WVJ9 160 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 FBXL8Q96CD0 374 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 KLHL29Q96CT2 875 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 NSL1Q96IY1 281 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 TIMM29Q9BSF4 260 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 NTMT1Q9BV86 223 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 LRMDAQ9H2I8 198 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 IPPKQ9H8X2 491 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 RIC8BQ9NVN3 520 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 TRPS1Q9UHF7 1281 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
UBFD1-203ENST00000564106 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 PCDHGA1Q9Y5H4 931 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 CAPN7Q9Y6W3 813 aa9.46□□□□□ -0.9
UBFD1-203ENST00000564106 SPTY2D1-AS1A0A0U1RR47 76 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 ZNF839A8K0R7 811 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 E9PBE3 544 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 IFRD1O00458 451 aaPredicted RBP9.45□□□□□ -0.9
UBFD1-203ENST00000564106 KALRNO60229 2985 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 KDM1AO60341 852 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 KLHL41O60662 606 aa9.45□□□□□ -0.9
UBFD1-203ENST00000564106 UGDHO60701 494 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms