RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KCNK5O95279 499 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 VIMP08670 466 aaKnown RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 CCND1P24385 295 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SHMT2P34897 504 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 PIK3CGP48736 1102 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 MAZP56270 477 aaKnown RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 HHEXQ03014 270 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TAP2Q03519 686 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 BST1Q10588 318 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 IFT88Q13099 833 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 NAE1Q13564 534 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 GPR18Q14330 331 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 FBXO48Q5FWF7 155 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TCEAL6Q6IPX3 200 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 ZCCHC8Q6NZY4 707 aaKnown RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 ZCCHC23Q6ZST2 131 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TMEM26Q6ZUK4 368 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 LRRC56Q8IYG6 542 aaPredicted RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 MINDY1Q8N5J2 469 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 OR2I1PQ8NGU4 316 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 OR4C6Q8NH72 309 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 ZNF483Q8TF39 744 aaPredicted RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 LCN9Q8WX39 176 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SMPDL3AQ92484 453 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TCEAL3Q969E4 200 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 ESAMQ96AP7 390 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 IL17FQ96PD4 163 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TRMOQ9BU70 441 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SGPP1Q9BX95 441 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 DRC3Q9H069 523 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 ATG10Q9H0Y0 220 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 GSTO2Q9H4Y5 243 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SLC32A1Q9H598 525 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 OPTCQ9UBM4 332 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 ASB1Q9Y576 335 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 PCDHGB2Q9Y5G2 931 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 ITPR1Q14643 2758 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 SNX3O60493 162 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 CCNT2O60583 730 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 SNNO75324 88 aaPredicted RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 WDR47O94967 919 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 GDF5P43026 501 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 ABCE1P61221 599 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 TBPL1P62380 186 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 CLCQ05315 142 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 RCN2Q14257 317 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 FASTKQ14296 549 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 STPG1Q5TH74 334 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 CES4AQ5XG92 561 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 FRMD7Q6ZUT3 714 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 THOC6Q86W42 341 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 AMIGO1Q86WK6 493 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 TEX9Q8N6V9 391 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 FAM181AQ8N9Y4 354 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 KYQ8NBH2 561 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 SETD7Q8WTS6 366 aaKnown RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 MED8Q96G25 268 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 CCDC177Q9NQR7 707 aaPredicted RBP12.49□□□□□ -0.41
SPG7-209ENST00000564047 DNAJC11Q9NVH1 559 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 THAP1Q9NVV9 213 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 OR6C2Q9NZP2 312 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 SLC22A14Q9Y267 594 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 ANGPTL3Q9Y5C1 460 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 GON4LQ3T8J9 2241 aa12.49□□□□□ -0.41
SPG7-209ENST00000564047 LILRA5A6NI73 299 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 TCP11X1B4DZS4 312 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 TRIM38O00635 465 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 PPM1DO15297 605 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 KATNA1O75449 491 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 MLYCDO95822 493 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 EPB42P16452 691 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 SLC1A6P48664 564 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 CDH13P55290 713 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
SPG7-209ENST00000564047 LCP2Q13094 533 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 BIRC2Q13490 618 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 GTF2H2Q13888 395 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 PLCL1Q15111 1095 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 ARL13AQ5H913 290 aaPredicted RBP12.48□□□□□ -0.41
SPG7-209ENST00000564047 GTF2H2CQ6P1K8 395 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 GOLGA7Q7Z5G4 137 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms