RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 CATP04040 527 aaKnown RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 EIF2S1P05198 315 aaKnown RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 CD63P08962 238 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 CMPK1P30085 196 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 ADARP55265 1226 aaKnown RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 GBX1Q14549 363 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 PPP1R7Q15435 360 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 CYP1B1Q16678 543 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 CYP2A13Q16696 494 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 TCTE1Q5JU00 501 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 FRMPD2BQ6IN97 320 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 SUSD1Q6UWL2 747 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 MCUQ8NE86 351 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 OR9A1PQ8NGU1 263 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 GRK7Q8WTQ7 553 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 COL26A1Q96A83 441 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 PTERQ96BW5 349 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 FER1L6-AS2Q96M78 137 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 SLC30A3Q99726 388 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 MLXIPLQ9NP71 852 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 FAM114A2Q9NRY5 505 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 SLC22A11Q9NSA0 550 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 P4HTMQ9NXG6 502 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 TRMT1Q9NXH9 659 aaKnown RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 A0A1W2PPV9 198 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 MAGEB16A2A368 324 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 FKBP9O95302 570 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 UMODP07911 640 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ERVK-10P10266 1014 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ITGAXP20702 1163 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 RPA3P35244 121 aaPredicted RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 SLC1A2P43004 574 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 OR1D4P47884 311 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 YBX1P67809 324 aaKnown RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 LONRF1Q17RB8 773 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 DCAF10Q5QP82 559 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ARMC3Q5W041 872 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 PAPD7Q5XG87 772 aaKnown RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 MRPL14Q6P1L8 145 aaKnown RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 PPP1R32Q7Z5V6 425 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 REXO1L1PQ8IX06 675 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 DTWD1Q8N5C7 304 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 OR2A1Q8NGT9 310 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 HMGCLL1Q8TB92 370 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 CPT1CQ8TCG5 803 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ZUFSPQ96AP4 578 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 SOX17Q9H6I2 414 aaPredicted RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ZC3H7BQ9UGR2 993 aaKnown RBP16.93■□□□□ 0.3
NME3-205ENST00000563854 ASIC3Q9UHC3 531 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 NEU2Q9Y3R4 380 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 MAU2Q9Y6X3 613 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 MED13Q9UHV7 2174 aa16.93■□□□□ 0.3
NME3-205ENST00000563854 ZCWPW2A0A1B0GU75 182 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 CYSRT1A8MQ03 144 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 TARM1B6A8C7 271 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 ZSCAN12O43309 604 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 ALOX12BO75342 701 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 VPS4BO75351 444 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 PIM1P11309 404 aaPredicted RBP16.92■□□□□ 0.3
NME3-205ENST00000563854 GCGRP47871 477 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 FNTAP49354 379 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 CLCN7P51798 805 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 MPP1Q00013 466 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 COX15Q7KZN9 410 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 PPIL6Q8IXY8 311 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 AGGF1Q8N302 714 aaeCLIP16.92■□□□□ 0.3
NME3-205ENST00000563854 NAT8LQ8N9F0 302 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 GIMAP7Q8NHV1 300 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 FKBP10Q96AY3 582 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 PKP4Q99569 1192 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 DPH7Q9BTV6 452 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 MRPS30Q9NP92 439 aaKnown RBP16.92■□□□□ 0.3
NME3-205ENST00000563854 SLAMF7Q9NQ25 335 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 STOX2Q9P2F5 926 aaPredicted RBP16.92■□□□□ 0.3
NME3-205ENST00000563854 CTSFQ9UBX1 484 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 VPS4AQ9UN37 437 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 PCDHGB7Q9Y5F8 929 aa16.92■□□□□ 0.3
NME3-205ENST00000563854 LOC105369274A0A096LPK9 316 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 LOC102723532A0A0G2JNH3 316 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 HYKKA2RU49 373 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 PSIP1O75475 530 aaKnown RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 IGHEP01854 428 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 UQCRFS1P47985 274 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 PNLIPRP1P54315 467 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 UBAP2LQ14157 1087 aaKnown RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 FAM214AQ32MH5 1076 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 PRR30Q53SZ7 412 aaPredicted RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 VWA5B1Q5TIE3 1220 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 YOD1Q5VVQ6 348 aaPredicted RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 JMJD6Q6NYC1 403 aaPredicted RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 ZNF549Q6P9A3 640 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms