RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 UGDHO60701 494 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 CELA2BP08218 269 aaPredicted RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 CSNK1EP49674 416 aaKnown RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 HTR6P50406 440 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 SRSF5Q13243 272 aaKnown RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 C1orf61Q13536 156 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 UBAP2LQ14157 1087 aaKnown RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 TMPRSS11BQ86T26 416 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 TRIM48Q8IWZ4 208 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 L3MBTL4Q8NA19 623 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 GAB3Q8WWW8 586 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 NEIL2Q969S2 332 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 SH3KBP1Q96B97 665 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 HBEGFQ99075 208 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 NRTNQ99748 197 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 SAR1AQ9NR31 198 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 TRBV23OR9-2A0A075B6M9 112 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 PRAMEF33A0A0G2JMD5 474 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 VPS4BO75351 444 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 KRT6AP02538 564 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 KRT6BP04259 564 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 KRT6CP48668 564 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 NXPH1P58417 271 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 LIPJQ5W064 366 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 TMEM198Q66K66 360 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 DTWD2Q8NBA8 298 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 SMPDL3AQ92484 453 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 XKR8Q9H6D3 395 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 RIC8BQ9NVN3 520 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 ZNF624Q9P2J8 865 aaPredicted RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 G3BP2Q9UN86 482 aaKnown RBP21.24■□□□□ 0.99
LINC01960-201ENST00000563759 SNX6Q9UNH7 406 aa21.24■□□□□ 0.99
LINC01960-201ENST00000563759 VILLO15195 856 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 ULK1O75385 1050 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 JUPP14923 745 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 NPPBP16860 134 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 PKLRP30613 574 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 XKR7Q5GH72 579 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 PMS2CLQ68D20 193 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 CATSPER2Q96P56 530 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 HAUS8Q9BT25 410 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 ACAT2Q9BWD1 397 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 ELOVL6Q9H5J4 265 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 KIR3DX1Q9H7L2 352 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 AKTIPQ9H8T0 292 aa21.23■□□□□ 0.99
LINC01960-201ENST00000563759 PRAMEF4O60810 478 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 WFS1O76024 890 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SLC2A4P14672 509 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 DOC2AQ14183 400 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 ABRAXAS2Q15018 415 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 ELOCQ15369 112 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 PRAMEF9Q5VWM5 478 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 LCTLQ6UWM7 567 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 LARP4Q71RC2 724 aaKnown RBP eCLIP21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SETD7Q8WTS6 366 aaKnown RBP21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SLC5A11Q8WWX8 675 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 MARK4Q96L34 752 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 TAC3Q9UHF0 121 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 ZNF490Q9ULM2 529 aaPredicted RBP21.22■□□□□ 0.99
LINC01960-201ENST00000563759 ICKQ9UPZ9 632 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 MANBAO00462 879 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 HNF4AP41235 474 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SLC19A1P41440 591 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 TEAD4Q15561 434 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 ZRSR2Q15696 482 aaKnown RBP21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SGO1Q5FBB7 561 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 GRHL2Q6ISB3 625 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 IYDQ6PHW0 289 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 LINC01555Q8NAE3 123 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 OR2L8Q8NGY9 312 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 PCBD2Q9H0N5 130 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 GIMAP2Q9UG22 337 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 SH2B3Q9UQQ2 575 aa21.22■□□□□ 0.99
LINC01960-201ENST00000563759 KCNE1BA0A087WTH5 132 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 UBDO15205 165 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 CD22P20273 847 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 PLCL1Q15111 1095 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 TBCCQ15814 346 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 GALNTL6Q49A17 601 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 FAM91A1Q658Y4 838 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 OR2T11Q8NH01 316 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 LCN9Q8WX39 176 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 PATE1Q8WXA2 126 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 CCDC106Q9BWC9 280 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 FARSBQ9NSD9 589 aaKnown RBP21.21■□□□□ 0.99
LINC01960-201ENST00000563759 FBXO4Q9UKT5 387 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 DOLKQ9UPQ8 538 aa21.21■□□□□ 0.99
LINC01960-201ENST00000563759 KIR2DS5A0A0G2JLQ3 304 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 A0A0G2JNG1 304 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 OR5K4A6NMS3 321 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PRR5-ARHGAP8B1AHC4 643 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 KIR2DS3K7RE56 304 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 SHMT2P34897 504 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 HNRNPH2P55795 449 aaKnown RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 HNRNPKP61978 463 aaKnown RBP eCLIP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PCDH1Q08174 1060 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 KIR2DS5Q14953 304 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 IMPG1Q17R60 797 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 SPRED3Q2MJR0 410 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 ATP6AP1LQ52LC2 224 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms