RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RNF44Q7L0R7 432 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 PID1Q7Z2X4 250 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 DNAJB8Q8NHS0 232 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-204ENST00000563739 DENND1AQ8TEH3 1009 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 DCUN1D1Q96GG9 259 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 IMMP1LQ96LU5 166 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 GPR137Q96N19 417 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 SIGLEC12Q96PQ1 595 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 C19orf43Q9BQ61 176 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 TRIM51Q9BSJ1 452 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 TSPAN10Q9H1Z9 355 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-204ENST00000563739 GOLPH3Q9H4A6 298 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 GSX1Q9H4S2 264 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-204ENST00000563739 RSPH14Q9UHP6 348 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 C3orf18Q9UK00 162 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 TDRKHQ9Y2W6 561 aaKnown RBP9.86□□□□□ -0.83
SF3B3-204ENST00000563739 KLK4Q9Y5K2 254 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 ABCA4P78363 2273 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 A0A0U1RQJ8 604 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 A0A1W2PPV9 198 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 DYTNA2CJ06 578 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 OR5H15A6NDH6 313 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 C5orf60A6NFR6 353 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 IDSB3KWA1 339 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 LIN7AO14910 233 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-204ENST00000563739 H2AFZP0C0S5 128 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 TMEM253P0C7T8 217 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ZFXP17010 805 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-204ENST00000563739 RBL1P28749 1068 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 FOXN2P32314 431 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 RAB28P51157 221 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ART1P52961 327 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 UBASH3AP57075 661 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ZBED6P86452 979 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 SPARCL1Q14515 664 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.834e-7■□□□□ 10.1
SF3B3-204ENST00000563739 GPR33Q49SQ1 333 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 CCSMST1Q4G0I0 132 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 RNFT1Q5M7Z0 435 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 FIGLAQ6QHK4 219 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 TMEM205Q6UW68 189 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 MEX3BQ6ZN04 569 aaKnown RBP9.85□□□□□ -0.83
SF3B3-204ENST00000563739 NEK10Q6ZWH5 1172 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 H2AFVQ71UI9 128 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 NDUFAF7Q7L592 441 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 CEP97Q8IW35 865 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 SLC35G2Q8TBE7 412 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 THAP3Q8WTV1 239 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-204ENST00000563739 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ARNT2Q9HBZ2 717 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 IRAK4Q9NWZ3 460 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 CAPN11Q9UMQ6 739 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 ASB1Q9Y576 335 aa9.85□□□□□ -0.83
SF3B3-204ENST00000563739 BZW2Q9Y6E2 419 aaKnown RBP9.85□□□□□ -0.83
SF3B3-204ENST00000563739 PHF3Q92576 2039 aaKnown RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 NSG1A0A0A6YYJ2 146 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 C2orf81A6NN90 581 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 MAP3K7O43318 606 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 FOXS1O43638 330 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 OR1I1O60431 355 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 GPC4O75487 556 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 AP2A2O94973 939 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 TPM3P06753 285 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 RALBP11234 206 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 CD1EP15812 388 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 CCR7P32248 378 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 NSG1P42857 185 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 NR2C2P49116 596 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 NR0B1P51843 470 aaKnown RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 GEMP55040 296 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 VSX2P58304 361 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SEMA3AQ14563 771 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 GRM7Q14831 915 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SLC18A3Q16572 532 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 LONRF1Q17RB8 773 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SYT16Q17RD7 645 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 IRAK1BP1Q5VVH5 260 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 YOD1Q5VVQ6 348 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 KCTD11Q693B1 232 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 FAAH2Q6GMR7 532 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 CNSTQ6PJW8 725 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 PACS1Q6VY07 963 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 C3P1Q6ZMU1 363 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SPPL2CQ8IUH8 684 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 ZC3H7AQ8IWR0 971 aaKnown RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SLC22A15Q8IZD6 547 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 OR2L8Q8NGY9 312 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 PHF10Q8WUB8 498 aaKnown RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 MIEF2Q96C03 454 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SCMH1Q96GD3 660 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 VAT1Q99536 393 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 SELENOSQ9BQE4 189 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 FSD1LQ9BXM9 530 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms