RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SYT16Q17RD7 645 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 LETM2Q2VYF4 491 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 DPCR1Q3MIW9 517 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 LRIT3Q3SXY7 679 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 CCDC92Q53HC0 331 aaPredicted RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MARCH8Q5T0T0 291 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 IRAK1BP1Q5VVH5 260 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 SIGIRRQ6IA17 410 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PSRC1Q6PGN9 363 aaPredicted RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 TSSK4Q6SA08 328 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 SARM1Q6SZW1 724 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PQLC2Q6ZP29 291 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 Q6ZTC4 211 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 GALNTL5Q7Z4T8 443 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ADGRF2Q8IZF7 708 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 CHCHD4Q8N4Q1 142 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 WDTC1Q8N5D0 677 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 FRMD1Q8N878 549 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MAB21L3Q8N8X9 362 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF441Q8N8Z8 693 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 FAM184AQ8NB25 1140 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 CD101Q93033 1021 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ATP6V0A1Q93050 837 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 CCDC34Q96HJ3 373 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 C8orf76Q96K31 380 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 TMEM68Q96MH6 324 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 FAM20AQ96MK3 541 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PKP4Q99569 1192 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 TEKT3Q9BXF9 490 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 FTOQ9C0B1 505 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ERVMER34-1Q9H9K5 563 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MMP25Q9NPA2 562 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 TCF7L2Q9NQB0 619 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PCDHB16Q9NRJ7 776 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 DONSONQ9NYP3 566 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 DDX25Q9UHL0 483 aaKnown RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 KIF3AQ9Y496 699 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 LOXL2Q9Y4K0 774 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MTCL1Q9Y4B5 1905 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 TGFB1I1O43294 461 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 NEMFO60524 1076 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 STBD1O95210 358 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 CXCL10P02778 98 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 EIF2S1P05198 315 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF182P17025 639 aaPredicted RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MUTP22033 750 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MARK3P27448 753 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 GJB2P29033 226 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 EEF1DP29692 281 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 GNL1P36915 607 aaPredicted RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 GARSP41250 739 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MSH2P43246 934 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 CCL23P55773 120 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 CSNK2A1P68400 391 aaPredicted RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 OLR1P78380 273 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MGAT3Q09327 533 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ILF3Q12906 894 aaKnown RBP eCLIP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SHHQ15465 462 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 UGCGQ16739 394 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ALG11Q2TAA5 492 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ACCSLQ4AC99 568 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 KCNT1Q5JUK3 1230 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 FRG2Q64ET8 278 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 TRNP1Q6NT89 227 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 C9orf139Q6ZV77 190 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 HAPLN4Q86UW8 402 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ZSCAN30Q86W11 494 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 RNF113BQ8IZP6 322 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 CSNK2A3Q8NEV1 391 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SPATA22Q8NHS9 363 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ATP8B4Q8TF62 1192 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 PSPC1Q8WXF1 523 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ARHGEF2Q92974 986 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SNX21Q969T3 373 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 HES6Q96HZ4 224 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MTMR9Q96QG7 549 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 PCGF1Q9BSM1 259 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 KCNN2Q9H2S1 579 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 AZI2Q9H6S1 392 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SLC35C2Q9NQQ7 365 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF302Q9NR11 478 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 SETD4Q9NVD3 440 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MRPL15Q9P015 296 aaKnown RBP4.72□□□□□ -1.65
LINC00254-201ENST00000563416 DLGAP2Q9P1A6 1054 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 TUBE1Q9UJT0 475 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 MKLN1Q9UL63 735 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 BRWD1Q9NSI6 2320 aa4.72□□□□□ -1.65
LINC00254-201ENST00000563416 UNC80Q8N2C7 3258 aa4.71□□□□□ -1.66
LINC00254-201ENST00000563416 IFNL4K9M1U5 179 aa4.71□□□□□ -1.66
LINC00254-201ENST00000563416 BMPR1BO00238 502 aa4.71□□□□□ -1.66
LINC00254-201ENST00000563416 VCYO14598 125 aa4.71□□□□□ -1.66
LINC00254-201ENST00000563416 CHMP2AO43633 222 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms