RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 INTS6Q9UL03 887 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 DLGAP4Q9Y2H0 992 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 C2orf78A6NCI8 922 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PABPN1LA6NDY0 278 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 ABLIM3O94929 683 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 INMTO95050 263 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 FUCA1P04066 466 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SEMG1P04279 462 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 HIST1H2AGP0C0S8 130 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 SDC1P18827 310 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 HIST1H2ADP20671 130 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PRPS1L1P21108 318 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CDH3P22223 829 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SERPINA4P29622 427 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 GRK3P35626 688 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 OPRL1P41146 370 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CSNK2BP67870 215 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SLC35A2P78381 396 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 SP140Q13342 867 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PLD1Q13393 1074 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 GBX1Q14549 363 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 VEPH1Q14D04 833 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 NPTX1Q15818 432 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 ZDHHC20Q5W0Z9 365 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 UBE2R2Q712K3 238 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 TMEM173Q86WV6 379 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CPA6Q8N4T0 437 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 ZNF461Q8TAF7 563 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 YIPF6Q96EC8 236 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 HIST1H2AHQ96KK5 128 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 HIST1H2AJQ99878 128 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 INPP5KQ9BT40 448 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 H2AFJQ9BTM1 129 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SPATA9Q9BWV2 254 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 MROQ9BYG7 248 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 TM6SF2Q9BZW4 377 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 AKIP1Q9NQ31 210 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 AASDHPPTQ9NRN7 309 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 THG1LQ9NWX6 298 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PPIL1Q9Y3C6 166 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 ARVCFO00192 962 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 NUAK1O60285 661 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 NBNO60934 754 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 JRKO75564 520 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 FTH1P02794 183 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 FABP3P05413 133 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 AMD1P17707 334 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 GPX2P18283 190 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 SLC6A12P48065 614 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 DAPP51397 102 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 PSMD7P51665 324 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 PIGFQ07326 219 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 PPP1R8Q12972 351 aaKnown RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 CBX3Q13185 183 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 ATP1A4Q13733 1029 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 VMACQ2NL98 169 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 PGS1Q32NB8 556 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 EGFLAMQ63HQ2 1017 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 Q6ZNB5 142 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 TPRG1Q6ZUI0 275 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 EIF3MQ7L2H7 374 aaKnown RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 TRIM73Q86UV7 250 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 CYP4Z1Q86W10 505 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 CNIH3Q8TBE1 160 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 IPCEF1Q8WWN9 437 aaPredicted RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 STARD8Q92502 1023 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 METTL2AQ96IZ6 378 aaKnown RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 ZNF641Q96N77 438 aaPredicted RBP12.73□□□□□ -0.37
USB1-207ENST00000563149 COPS8Q99627 209 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 FBXO8Q9NRD0 319 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 VNN3Q9NY84 501 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 PPT2Q9UMR5 302 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 MAPRE3Q9UPY8 281 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 GMPPBQ9Y5P6 360 aa12.73□□□□□ -0.37
USB1-207ENST00000563149 IGLV3-16A0A075B6K0 115 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 K7ERQ8 282 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 M0R3G1 203 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 UGDHO60701 494 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 GSNP06396 782 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 ALOX5P09917 674 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 ELNP15502 786 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 KDELR2P33947 212 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 CDKN2CP42773 168 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 MAGEA8P43361 318 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms