RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ZC3HC1Q86WB0 502 aaKnown RBP15.96■□□□□ 0.15
CDT1-202ENST00000562747 CCDC25Q86WR0 208 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 GPATCH11Q8N954 259 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 C19orf47Q8N9M1 422 aaKnown RBP15.96■□□□□ 0.15
CDT1-202ENST00000562747 DENND1AQ8TEH3 1009 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 ELMO2Q96JJ3 720 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 ZNF71Q9NQZ8 489 aaPredicted RBP15.96■□□□□ 0.15
CDT1-202ENST00000562747 ZDHHC18Q9NUE0 388 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 TUBD1Q9UJT1 453 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 VWA7Q9Y334 891 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 PSAT1Q9Y617 370 aa15.96■□□□□ 0.15
CDT1-202ENST00000562747 TCRBV9S1A1TA0A576 114 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 CLEC18AA5D8T8 446 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 ZNF839A8K0R7 811 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 PRICKLE3O43900 615 aaPredicted RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 MT-ND3P03897 115 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 PRKAR1AP10644 381 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 ZNF28P17035 718 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 OAS2P29728 719 aaKnown RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 CCR10P46092 362 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 ABHD18Q0P651 414 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 GPR19Q15760 415 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 CLEC18BQ6UXF7 455 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 CEP128Q6ZU80 1094 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 PIWIL4Q7Z3Z4 852 aaKnown RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 C2orf73Q8N5S3 287 aaPredicted RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 ESX1Q8N693 406 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 CLEC18CQ8NCF0 446 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 EEF1AKMT1Q8WVE0 214 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 SLC45A3Q96JT2 553 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 KLHL25Q9H0H3 589 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 RHOJQ9H4E5 214 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 SMYD2Q9NRG4 433 aa15.95■□□□□ 0.14
CDT1-202ENST00000562747 INTS7Q9NVH2 962 aaKnown RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 DMGDHQ9UI17 866 aaKnown RBP15.95■□□□□ 0.14
CDT1-202ENST00000562747 KRT87PA6NCN2 255 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 FAM159BA6NKW6 160 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 TIAF1O95411 115 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 C8GP07360 202 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 CASRP41180 1078 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 GPX6P59796 221 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 IL2P60568 153 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 CDC20Q12834 499 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 SP140Q13342 867 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 UBAP2LQ14157 1087 aaKnown RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 SF1Q15637 639 aaKnown RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 ATP1A1-AS1Q5TC04 95 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 PWWP2BQ6NUJ5 590 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 C6orf15Q6UXA7 325 aaPredicted RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 CDHR3Q6ZTQ4 885 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 UBE2R2Q712K3 238 aaPredicted RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 TAX1BP1Q86VP1 789 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 MYO1HQ8N1T3 1032 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 LMNTD1Q8N9Z9 388 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 C9orf43Q8TAL5 461 aaPredicted RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 RNF31Q96EP0 1072 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 PKP4Q99569 1192 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 OLFM1Q99784 485 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 CPNE1Q99829 537 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 MCMBPQ9BTE3 642 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 GPN2Q9H9Y4 310 aaPredicted RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 LRRC4CQ9HCJ2 640 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 TXNDC16Q9P2K2 825 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 MTRF1LQ9UGC7 380 aaKnown RBP15.94■□□□□ 0.14
CDT1-202ENST00000562747 NBASA2RRP1 2371 aa15.94■□□□□ 0.14
CDT1-202ENST00000562747 FAM95CA0A1B0GW59 222 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 A0A1W2PPV9 198 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 TMEM150CB9EJG8 249 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 SLC16A5O15375 505 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 CYP2A7P20853 494 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 STX2P32856 288 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 FASTKQ14296 549 aaKnown RBP15.93■□□□□ 0.14
CDT1-202ENST00000562747 ZIC1Q15915 447 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 TMEM126BQ8IUX1 230 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 SPNS2Q8IVW8 549 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 SMPDL3AQ92484 453 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 N4BP2L2Q92802 583 aaPredicted RBP15.93■□□□□ 0.14
CDT1-202ENST00000562747 LINGO1Q96FE5 620 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 VPS39Q96JC1 886 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 CATSPER2Q96P56 530 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 EFHD1Q9BUP0 239 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 TSPYL1Q9H0U9 437 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 FAM60AQ9NP50 221 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 SERTAD3Q9UJW9 196 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 PCDHB3Q9Y5E6 796 aa15.93■□□□□ 0.14
CDT1-202ENST00000562747 CXorf49A8MYA2 514 aaPredicted RBP15.92■□□□□ 0.14
CDT1-202ENST00000562747 TARM1B6A8C7 271 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 CPNE3O75131 537 aaKnown RBP15.92■□□□□ 0.14
CDT1-202ENST00000562747 SCRG1O75711 98 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 TSPAN12O95859 305 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 SLC16A8O95907 504 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 SYF2O95926 243 aaKnown RBP15.92■□□□□ 0.14
CDT1-202ENST00000562747 C1QAP02745 245 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 MAGP20916 626 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 GP5P40197 560 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 STAT5AP42229 794 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 GABRA4P48169 554 aa15.92■□□□□ 0.14
CDT1-202ENST00000562747 PNLIPRP1P54315 467 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms