RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CES2O00748 559 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PRICKLE3O43900 615 aaPredicted RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ALOX12BO75342 701 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 RFPL1O75677 317 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PIAS1O75925 651 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 MED26O95402 600 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 MATN4O95460 622 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SFTPCP11686 197 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SAT1P21673 171 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 IVDP26440 423 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 GABRB3P28472 473 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 RPA3P35244 121 aaPredicted RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ELK3P41970 407 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PAFAH1B1P43034 410 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 OR1D4P47884 311 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ATP1A4Q13733 1029 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 GBX1Q14549 363 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 FASTKD3Q14CZ7 662 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 NCF4Q15080 339 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 IGFBP7Q16270 282 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PAPD7Q5XG87 772 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 MBOAT1Q6ZNC8 495 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ADCK2Q7Z695 626 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SYVN1Q86TM6 617 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 RAB42Q8N4Z0 105 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 GPATCH11Q8N954 259 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 OR2L3Q8NG85 312 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 OR2A1Q8NGT9 310 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 CD200R1Q8TD46 325 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 INPP5DQ92835 1189 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 GBP5Q96PP8 586 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 EBNA1BP2Q99848 306 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SELENOSQ9BQE4 189 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 WDR83Q9BRX9 315 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 AARSD1Q9BTE6 412 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 DPH7Q9BTV6 452 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 GPR87Q9BY21 358 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 NLNQ9BYT8 704 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ADNPQ9H2P0 1102 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SYNPO2LQ9H987 977 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PLAC1Q9HBJ0 212 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ACSS2Q9NR19 701 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 SLC22A11Q9NSA0 550 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 INTS10Q9NVR2 710 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ZC3H7BQ9UGR2 993 aaKnown RBP9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 TAC3Q9UHF0 121 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 PCYOX1Q9UHG3 505 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 ADAMTS6Q9UKP5 1117 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 NBASA2RRP1 2371 aa9.09□□□□□ -0.95
NSMCE1-203ENST00000562039 EFCAB8A8MWE9 144 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 MKRN2OSH3BPM6 223 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 SUV39H1O43463 412 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 VPS26AO75436 327 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 PSIP1O75475 530 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CATP04040 527 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 HBQ1P09105 142 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ITGAXP20702 1163 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CMPK1P30085 196 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CCNFP41002 786 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 RPL21P46778 160 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 PMS2P54278 862 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 PNLIPRP1P54315 467 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CDKN2DP55273 166 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 DCDP81605 110 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 TIAL1Q01085 375 aaKnown RBP eCLIP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 TLE1Q04724 770 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 TTLL9Q3SXZ7 439 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 NKAIN1Q4KMZ8 207 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 SPANXN3Q5MJ09 141 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 WASHC2DQ5SRD0 308 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 THEMIS2Q5TEJ8 643 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 PAQR3Q6TCH7 311 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CYHR1Q6ZMK1 362 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF517Q6ZMY9 492 aaPredicted RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ATG14Q6ZNE5 492 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ASB18Q6ZVZ8 466 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 UBE2R2Q712K3 238 aaPredicted RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 AMER2Q8N7J2 671 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CALML6Q8TD86 181 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 MAGEC3Q8TD91 643 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF480Q8WV37 535 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 EEF1AKMT1Q8WVE0 214 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 DLG3Q92796 817 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 SLC22A18Q96BI1 424 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 LRFN5Q96NI6 719 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 MESP1Q9BRJ9 268 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 FAM167BQ9BTA0 163 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 YIPF2Q9BWQ6 316 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 RAB11FIP5Q9BXF6 653 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 ING2Q9H160 280 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 EPN3Q9H201 632 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 SOX17Q9H6I2 414 aaPredicted RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 MRPS30Q9NP92 439 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CUTCQ9NTM9 273 aa9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 INTS7Q9NVH2 962 aaKnown RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 CUEDC1Q9NWM3 386 aaPredicted RBP9.08□□□□□ -0.96
NSMCE1-203ENST00000562039 SPATA7Q9P0W8 599 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms