RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MRRFQ96E11 262 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 GPR22Q99680 433 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 SLC12A9Q9BXP2 914 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 CDC42EP4Q9H3Q1 356 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 STOX2Q9P2F5 926 aaPredicted RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 LNPEPQ9UIQ6 1025 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 CACNA1GO43497 2377 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 K7ENP7 123 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 ZBTB14O43829 449 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 KDM1AO60341 852 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 MED26O95402 600 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 MSL3P1P0C860 447 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 MYBL2P10244 700 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 GP5P40197 560 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 RGS4P49798 205 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 IL2P60568 153 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 CYP4F2P78329 520 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 DLG1Q12959 904 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 INO80CQ6PI98 192 aaPredicted RBP13.36□□□□□ -0.27
TPM1-230ENST00000561266 SBSNQ6UWP8 590 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 GSPT2Q8IYD1 628 aaKnown RBP13.36□□□□□ -0.27
TPM1-230ENST00000561266 DTWD1Q8N5C7 304 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
TPM1-230ENST00000561266 MAGEC3Q8TD91 643 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 TCTN2Q96GX1 697 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 PDLIM5Q96HC4 596 aaKnown RBP13.36□□□□□ -0.27
TPM1-230ENST00000561266 FMO2Q99518 471 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 CPNE1Q99829 537 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 RAB11FIP5Q9BXF6 653 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 CHRNA10Q9GZZ6 450 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 ATG10Q9H0Y0 220 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 PARVBQ9HBI1 364 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 ABCF3Q9NUQ8 709 aa13.36□□□□□ -0.27
TPM1-230ENST00000561266 ATMQ13315 3056 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 LOC105369274A0A096LPK9 316 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 LOC102723532A0A0G2JNH3 316 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 NPEPPSL1A6NEC2 478 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 SCRG1O75711 98 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 C8GP07360 202 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 STAT5AP42229 794 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 GCGRP47871 477 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 SNRPNP63162 240 aaKnown RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 TSTA3Q13630 321 aaPredicted RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 PPP1R3AQ16821 1122 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 C18orf21Q32NC0 220 aaPredicted RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 MANEAQ5SRI9 462 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 FAM69BQ5VUD6 431 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 FRMPD2BQ6IN97 320 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 FBXO42Q6P3S6 717 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 C6orf15Q6UXA7 325 aaPredicted RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 CCDC81Q6ZN84 652 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 CMC1Q7Z7K0 106 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 TMEM126BQ8IUX1 230 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 MCATQ8IVS2 390 aaKnown RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 SYTL1Q8IYJ3 562 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 OR4N4Q8N0Y3 316 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 MYO1HQ8N1T3 1032 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 IL22RA1Q8N6P7 574 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 SNRNP27Q8WVK2 155 aaKnown RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 SMPDL3AQ92484 453 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 FUT8Q9BYC5 575 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 NSMCE4AQ9NXX6 385 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
TPM1-230ENST00000561266 TAC3Q9UHF0 121 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 CROTQ9UKG9 612 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 PCDHGA4Q9Y5G9 962 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 KLK4Q9Y5K2 254 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 PCSK5Q92824 1860 aa13.35□□□□□ -0.27
TPM1-230ENST00000561266 IGSF10Q6WRI0 2623 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 SLC16A5O15375 505 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ZNF749O43361 778 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ACSL3O95573 720 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 CAPN1P07384 714 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 MAP4P27816 1152 aaKnown RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 STX2P32856 288 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 RORAP35398 523 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 KCNC1P48547 511 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 CSRP3P50461 194 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ITGA1P56199 1179 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 TMPRSS3P57727 454 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 POU4F1Q01851 419 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ABHD18Q0P651 414 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 BMPR2Q13873 1038 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 MAP7Q14244 749 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 USP10Q14694 798 aaKnown RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 ARHGAP19Q14CB8 494 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 ATP1A1-AS1Q5TC04 95 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 BROXQ5VW32 411 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 ICE2Q659A1 982 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms