RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GM2AP17900 193 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CD58P19256 250 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 DNASE1P24855 282 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 DNA2P51530 1060 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 RAD23BP54727 409 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 GFERP55789 205 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 NUCB2P80303 420 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 ARF5P84085 180 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PPP2R2BQ00005 443 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SLC10A2Q12908 348 aaPredicted RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 GPS2Q13227 327 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 BIRC3Q13489 604 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 BIRC2Q13490 618 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 ZACNQ401N2 412 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 C5orf22Q49AR2 442 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PLEKHS1Q5SXH7 462 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SYPL2Q5VXT5 272 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CES4AQ5XG92 561 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 NCCRP1Q6ZVX7 275 aaPredicted RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 CAMKMTQ7Z624 323 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 AMIGO2Q86SJ2 522 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 TAC4Q86UU9 113 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CHSY1Q86X52 802 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PPP1R3BQ86XI6 285 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SFRP1Q8N474 314 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PCDH20Q8N6Y1 951 aaKnown RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 CNTD1Q8N815 330 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PPM1NQ8N819 430 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 ENDOVQ8N8Q3 282 aaKnown RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 DNAAF3Q8N9W5 541 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SLC4A11Q8NBS3 891 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CATSPER1Q8NEC5 780 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 TOR1AIP2Q8NFQ8 470 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 OR6K2Q8NGY2 324 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 UBA3Q8TBC4 463 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CXorf40AQ8TE69 158 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SLC37A2Q8TED4 501 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PARD3BQ8TEW8 1205 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 PPP4R1Q8TF05 950 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CLEC4CQ8WTT0 213 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SLC35F5Q8WV83 523 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 IRGQQ8WZA9 623 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 TM9SF4Q92544 642 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 NR4A3Q92570 626 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 ARHGEF26Q96DR7 871 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 BTN2A3PQ96KV6 586 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 FCRL4Q96PJ5 515 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 ZNF559Q9BR84 538 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 TBC1D10AQ9BXI6 508 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 GSDMCQ9BYG8 508 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 NLNQ9BYT8 704 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CYP3A43Q9HB55 503 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 AGPAT3Q9NRZ7 376 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 RLIMQ9NVW2 624 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 OGFRQ9NZT2 677 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 KCNN3Q9UGI6 736 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 SH3BGRL2Q9UJC5 107 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 MEMO1Q9Y316 297 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 NOTCH1P46531 2555 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 WDR91A4D1P6 747 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 PRSS29PA6NIE9 313 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 ADAM10O14672 748 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 TOX3O15405 576 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 THAP12O43422 761 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 SPRY1O43609 319 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 KIF1CO43896 1103 aaKnown RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 SLC19A2O60779 497 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 CLDN11O75508 207 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 KLF7O75840 302 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 URI1O94763 535 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 SLCO2B1O94956 709 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 UGT2B4P06133 528 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 HOXD4P09016 255 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 FOLR1P15328 257 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 CD19P15391 556 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 DRD4P21917 467 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 KELP23276 732 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 UBA7P41226 1012 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 GNPDA1P46926 289 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 ARCN1P48444 511 aaKnown RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 POLD2P49005 469 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 SERPINH1P50454 418 aaKnown RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 CYP2J2P51589 502 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 DGKQP52824 942 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 AP3M2P53677 418 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 SLC16A1P53985 500 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 CDH4P55283 916 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 PITX1P78337 314 aaPredicted RBP3.64□□□□□ -1.83
HERC1-211ENST00000560983 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 ILF3Q12906 894 aaKnown RBP eCLIP3.64□□□□□ -1.83
HERC1-211ENST00000560983 NFATC2Q13469 925 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 ALCAMQ13740 583 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 KCNAB1Q14722 419 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 DEFB113Q30KQ7 82 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 MYLK3Q32MK0 819 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 ALFQ53S48 1182 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 C1orf220Q5T0J3 134 aa3.64□□□□□ -1.83
HERC1-211ENST00000560983 C11orf87Q6NUJ2 197 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms