RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 IL22RA1Q8N6P7 574 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 FBF1Q8TES7 1133 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 SMPDL3AQ92484 453 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 CPNE1Q99829 537 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 IL17BQ9UHF5 180 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 PCDHB3Q9Y5E6 796 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 TARM1B6A8C7 271 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 SCRG1O75711 98 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF37AP17032 561 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 GP5P40197 560 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 GCGRP47871 477 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 GPS2Q13227 327 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 SP140Q13342 867 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF460Q14592 562 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 GPR155Q7Z3F1 870 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 MYO1HQ8N1T3 1032 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 PPFIBP2Q8ND30 876 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 ANKRD49Q8WVL7 239 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 CDKL2Q92772 493 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 ZUFSPQ96AP4 578 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 LRFN5Q96NI6 719 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 GPR22Q99680 433 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 RBBP8Q99708 897 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 MIPEPQ99797 713 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 SPRTNQ9H040 489 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 L2HGDHQ9H9P8 463 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 PARVBQ9HBI1 364 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 LHX9Q9NQ69 397 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 ENAMQ9NRM1 1142 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 NINJ2Q9NZG7 142 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 STOX2Q9P2F5 926 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 SERTAD3Q9UJW9 196 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 RALYQ9UKM9 306 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 HEATR5BQ9P2D3 2071 aa14.68□□□□□ -0.06
SNRPA1-213ENST00000560856 IGKV1-8A0A0C4DH67 115 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 MAP3K7O43318 606 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 NRP2O60462 931 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 CTSVO60911 334 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 FAM155BO75949 473 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 RORAP35398 523 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 ITGA1P56199 1179 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 POU4F1Q01851 419 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 ILF2Q12905 390 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 EFTUD2Q15029 972 aaKnown RBP eCLIP14.67□□□□□ -0.068e-8■■■■■ 27.9
SNRPA1-213ENST00000560856 SBSNQ6UWP8 590 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 MBOAT1Q6ZNC8 495 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 TMEM126BQ8IUX1 230 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 MCATQ8IVS2 390 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 MCOLN3Q8TDD5 553 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 IFT81Q8WYA0 676 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 ANKRD7Q92527 254 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 SLC45A3Q96JT2 553 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 CCDC138Q96M89 665 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF285Q96NJ3 590 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 ACAT2Q9BWD1 397 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 FUT8Q9BYC5 575 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 FANCEQ9HB96 536 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 SLC6A20Q9NP91 592 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 EURLQ9NYK6 297 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 MTRF1LQ9UGC7 380 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 PADI1Q9ULC6 663 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 PLCL2Q9UPR0 1127 aa14.67□□□□□ -0.06
SNRPA1-213ENST00000560856 FER1L5A0AVI2 2057 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 OR2A25A4D2G3 310 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF749O43361 778 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CPNE3O75131 537 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 SYF2O95926 243 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 MT-ND3P03897 115 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CYP2A7P20853 494 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 SAT1P21673 171 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 STX2P32856 288 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 PRDX1Q06830 199 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 NAB1Q13506 487 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 ZKSCAN8Q15776 578 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 PPP1R3AQ16821 1122 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 GRTP1Q5TC63 336 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF385CQ66K41 422 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF425Q6IV72 752 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 LCN10Q6JVE6 187 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 FBXO42Q6P3S6 717 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CTAGE3PQ8IX95 158 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 SYTL1Q8IYJ3 562 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 NKAPQ8N5F7 415 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 FMO2Q99518 471 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 DPH7Q9BTV6 452 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CDC42EP4Q9H3Q1 356 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 SYNPO2LQ9H987 977 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CAB39LQ9H9S4 337 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 POPDC3Q9HBV1 291 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 PCMTD2Q9NV79 361 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 INTS7Q9NVH2 962 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 TAC3Q9UHF0 121 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 CROTQ9UKG9 612 aa14.66□□□□□ -0.06
SNRPA1-213ENST00000560856 HMX2A2RU54 273 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF839A8K0R7 811 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 E7EQ34 232 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms