RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LINC00303Q3SY05 128 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 HECTD2Q5U5R9 776 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM45BPQ6NSW5 357 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 TLDC1Q6P9B6 456 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PAQR3Q6TCH7 311 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 ADCK2Q7Z695 626 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 MCATQ8IVS2 390 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR2L3Q8NG85 312 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 OR2A1Q8NGT9 310 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 HMGCLL1Q8TB92 370 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM45AQ8TCE6 357 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 MCOLN3Q8TDD5 553 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 ASB11Q8WXH4 323 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZUFSPQ96AP4 578 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 MED8Q96G25 268 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 LRFN5Q96NI6 719 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PLAC1Q9HBJ0 212 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 MRPS30Q9NP92 439 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PCMTD2Q9NV79 361 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 DHCR7Q9UBM7 475 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 NDOR1Q9UHB4 597 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 GPN3Q9UHW5 284 aaPredicted RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 CDC23Q9UJX2 597 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 SNX7Q9UNH6 387 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 FARSAQ9Y285 508 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 SPTBP11277 2137 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 TARM1B6A8C7 271 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 E7ESA3 106 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 EIF3FO00303 357 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 TP73O15350 636 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 FKBP9O95302 570 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 EIF2S1P05198 315 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 CTSBP07858 339 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 HIST1H2AGP0C0S8 130 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 HIST1H2ADP20671 130 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 IL2P60568 153 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC7A5Q01650 507 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 CAV1Q03135 178 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC9A5Q14940 896 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 NAA25Q14CX7 972 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 CYP2A13Q16696 494 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 FCRL6Q6DN72 434 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 GALNT7Q86SF2 657 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 ENDOVQ8N8Q3 282 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 APOBEC4Q8WW27 367 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 SEC14L1Q92503 715 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 CDKL2Q92772 493 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 DLG3Q92796 817 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 ALKBH8Q96BT7 664 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 HIST1H2AHQ96KK5 128 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 HIST1H2AJQ99878 128 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 H2AFJQ9BTM1 129 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 DPH7Q9BTV6 452 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 CHRNA10Q9GZZ6 450 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 STARD5Q9NSY2 213 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 NSMCE4AQ9NXX6 385 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 GRHL1Q9NZI5 618 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 IFT80Q9P2H3 777 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 TAC3Q9UHF0 121 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 SRPK3Q9UPE1 567 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 POLHQ9Y253 713 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 VWA7Q9Y334 891 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 PCDHGA6Q9Y5G7 932 aa12.46□□□□□ -0.41
CTDSPL2-209ENST00000560620 A0A0J9YVX5 310 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 A0A1W2PPV9 198 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 GFYI3L273 518 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 TERTO14746 1132 aaKnown RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 EIF3HO15372 352 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 PRICKLE3O43900 615 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 CCNDBP1O95273 360 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 C8GP07360 202 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 SFTPCP11686 197 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 SSTR1P30872 391 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 RORAP35398 523 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 GABRA4P48169 554 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 PGGT1BP53609 377 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 SLC12A2P55011 1212 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 POLE2P56282 527 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 VSX2P58304 361 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 DCDP81605 110 aaKnown RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 FRG1Q14331 258 aaKnown RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 WHAMMP3Q1A5X7 153 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 LCN10Q6JVE6 187 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 RHBDD2Q6NTF9 364 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 CYHR1Q6ZMK1 362 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 TTLL10Q6ZVT0 673 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 SYVN1Q86TM6 617 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms