RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CDH3P22223 829 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 SERPINA4P29622 427 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 RAB28P51157 221 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 KPNA2P52292 529 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 SNRPFP62306 86 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 SORDQ00796 357 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CDK5R2Q13319 367 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 LSAMPQ13449 338 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 ODF1Q14990 250 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 OR1C1Q15619 314 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 TXNRD3NBQ6F5E7 133 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 ARMC6Q6NXE6 501 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CNSTQ6PJW8 725 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 LYPD4Q6UWN0 246 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 LCLAT1Q6UWP7 414 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 HSD11B1LQ7Z5J1 315 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 OOSP2Q86WS3 158 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 AMER3Q8N944 861 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 ZNF610Q8N9Z0 462 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 TAS1R2Q8TE23 839 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 TMEM171Q8WVE6 324 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CASKIN2Q8WXE0 1202 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 N4BP2L2Q92802 583 aaPredicted RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 C8orf44Q96CB5 159 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 RBMXL1Q96E39 390 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 COX14Q96I36 57 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 PPM1MQ96MI6 270 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 TUBGCP5Q96RT8 1024 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 OLFM1Q99784 485 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 ZYG11BQ9C0D3 744 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 ATP13A3Q9H7F0 1226 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 SLC22A11Q9NSA0 550 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 MTRF1LQ9UGC7 380 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 TAGLN3Q9UI15 199 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 NXT1Q9UKK6 140 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 MPDZO75970 2070 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 CCDC189A1A4V9 331 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 ZNF561-AS1K7EIQ3 104 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 CASKO14936 926 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 FGF10O15520 208 aaPredicted RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 LMX1BO60663 402 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 HEXIM1O94992 359 aaKnown RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 CBX7O95931 251 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 SP1P08047 785 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 CELA2AP08217 269 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 VDRP11473 427 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 TFEBP19484 476 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 BMP5P22003 454 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 RPL10P27635 214 aaKnown RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 LMAN1P49257 510 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 AP2B1P63010 937 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 TUBA3CQ13748 450 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 MESDQ14696 234 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 TMEM249Q2WGJ8 235 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 GRAMD1BQ3KR37 738 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 GXYLT1Q4G148 440 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 COBLL1Q53SF7 1204 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 INO80DQ53TQ3 878 aaPredicted RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 FAM120AOSQ5T036 256 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 FAM102AQ5T9C2 384 aaPredicted RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 ARL6IP4Q66PJ3 421 aaKnown RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 TUBA3EQ6PEY2 450 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 ABRAXAS1Q6UWZ7 409 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 UNC5DQ6UXZ4 953 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 PLEKHM3Q6ZWE6 761 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 NDUFAF7Q7L592 441 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 RELL2Q8NC24 303 aaPredicted RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 EXD1Q8NHP7 514 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 SLC35G2Q8TBE7 412 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 AP2M1Q96CW1 435 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 EEF2KMTQ96G04 330 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 CELF6Q96J87 481 aaKnown RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 C8orf76Q96K31 380 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 DACH2Q96NX9 599 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 ELAC2Q9BQ52 826 aaKnown RBP6.07□□□□□ -1.44
HERC1-208ENST00000560462 PNPLA3Q9NST1 481 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 PDRG1Q9NUG6 133 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 ANKRD10Q9NXR5 420 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 LHX3Q9UBR4 397 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 PCDHGB1Q9Y5G3 927 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 FAM215AQ9Y5M1 114 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 CAPN6Q9Y6Q1 641 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 CPAMD8Q8IZJ3 1885 aa6.07□□□□□ -1.44
HERC1-208ENST00000560462 FREM1Q5H8C1 2179 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 FAM95CA0A1B0GW59 222 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 GSAPA4D1B5 854 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 QSOX1O00391 747 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 DVL2O14641 736 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 PIN1P1O15428 100 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 ZSCAN9O15535 394 aaPredicted RBP6.06□□□□□ -1.44
HERC1-208ENST00000560462 KDELR3O43731 214 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 PDE9AO76083 593 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 PYGLP06737 847 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 ITGAMP11215 1152 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 COX6A1P12074 109 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 IGFBP5P24593 272 aa6.06□□□□□ -1.44
HERC1-208ENST00000560462 VIPR1P32241 457 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms