RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ABATP80404 500 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 CYP4F3Q08477 520 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 CDKL4Q5MAI5 379 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 LINC01555Q8NAE3 123 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 ZNF248Q8NDW4 579 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 UBXN10Q96LJ8 280 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 RUVBL2Q9Y230 463 aaKnown RBP13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 ACTL7BQ9Y614 415 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 A0A087X1B8 175 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 POC1B-GALNT4F8VUJ3 575 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 KIF1CO43896 1103 aaKnown RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PRICKLE3O43900 615 aaPredicted RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 KRT37O76014 449 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC16A8O95907 504 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 FGF5P12034 268 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 CREB1P16220 341 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 LSP1P33241 339 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 MSH2P43246 934 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 HNMTP50135 292 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 SERPINB8P50452 374 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 EFTUD2Q15029 972 aaKnown RBP eCLIP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 TAF1BQ53T94 588 aaPredicted RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 FOXR1Q6PIV2 292 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 ADGRD1Q6QNK2 874 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 TBC1D1Q86TI0 1168 aaPredicted RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 TRABD2AQ86V40 505 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PPP1R3BQ86XI6 285 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 CEP97Q8IW35 865 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 SYTL1Q8IYJ3 562 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 ZCCHC14Q8WYQ9 949 aaKnown RBP13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 ISL2Q96A47 359 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 MTBPQ96DY7 904 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 TRAPPC9Q96Q05 1148 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PAFAH2Q99487 392 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PKP4Q99569 1192 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 SOHLH2Q9NX45 425 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 RARRES3Q9UL19 164 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PLAGL1Q9UM63 463 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 PDE10AQ9Y233 779 aa13.49□□□□□ -0.25
PKNOX1-209ENST00000560448 E7ENX8 843 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 STMND1H3BQB6 276 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 RRP8O43159 456 aaKnown RBP13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 PIAS1O75925 651 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 CCL4P13236 92 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 CHN1P15882 459 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 ITIH1P19827 911 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 CMPK1P30085 196 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC5A2P31639 672 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 SEPHS1P49903 392 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 MAPK10P53779 464 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 PPP1CAP62136 330 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TAP2Q03519 686 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 RELAQ04206 551 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TUBB3Q13509 450 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 MAP7Q14244 749 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 ZC3H12BQ5HYM0 836 aaKnown RBP13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TMEM207Q6UWW9 146 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 RAPH1Q70E73 1250 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TCAIMQ8N3R3 496 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 DCAKDQ8WVC6 231 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 USP7Q93009 1102 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 CABS1Q96KC9 395 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 CCDC177Q9NQR7 707 aaPredicted RBP13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 OCIAD1Q9NX40 245 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 ARL15Q9NXU5 204 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 SPHK1Q9NYA1 384 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 PSMC3IPQ9P2W1 217 aaPredicted RBP13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TBK1Q9UHD2 729 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 KIF26BQ2KJY2 2108 aa13.48□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC9B1P1A6NJY1 282 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 C9orf172C9J069 976 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 MT-ND3P03897 115 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ANXA5P08758 320 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CCDC166P0CW27 439 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 HGFP14210 728 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ST6GAL1P15907 406 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 IMPA1P29218 277 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 RPA3P35244 121 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CSRP3P50461 194 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FOXM1Q08050 763 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 PPP1R3AQ16821 1122 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CCSMST1Q4G0I0 132 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 SBSNQ6UWP8 590 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FRA10AC1Q70Z53 315 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms