RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 EFL1Q7Z2Z2 1120 aaKnown RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 MTDHQ86UE4 582 aaKnown RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 MYLK4Q86YV6 388 aaPredicted RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 CHCHD4Q8N4Q1 142 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 C2orf73Q8N5S3 287 aaPredicted RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 SETD7Q8WTS6 366 aaKnown RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 STON2Q8WXE9 905 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 C19orf60Q96EN9 201 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 MIPEPQ99797 713 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 RAB11FIP5Q9BXF6 653 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 TUBB1Q9H4B7 451 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 KIR3DX1Q9H7L2 352 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 MEAF6Q9HAF1 191 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 TCF7L2Q9NQB0 619 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 TMEM74BQ9NUR3 256 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 GPRC5BQ9NZH0 403 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 KCNE2Q9Y6J6 123 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 CACNA1IQ9P0X4 2223 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 ZFC3H1O60293 1989 aaKnown RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 LRP4O75096 1905 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 A0A1B0GVT2 93 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 OR5K4A6NMS3 321 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 E7EQ34 232 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SDHDO14521 159 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PIP5K1BO14986 540 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 AHCYL1O43865 530 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PRAMEF4O60810 478 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 XRCC1P18887 633 aaPredicted RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 GNAZP19086 355 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 HMOX2P30519 316 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 HNRNPKP61978 463 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP3-218ENST00000560202 IRF8Q02556 426 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PCDH1Q08174 1060 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 CHIT1Q13231 466 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ZNF528Q3MIS6 628 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 GGTA1PQ4G0N0 100 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 THEMIS2Q5TEJ8 643 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PRAMEF9Q5VWM5 478 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ACAD11Q709F0 780 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 CEP68Q76N32 757 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 TRPM8Q7Z2W7 1104 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 DDIASQ8IXT1 998 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 L3MBTL4Q8NA19 623 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LINC01555Q8NAE3 123 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 FAM46DQ8NEK8 389 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 OR2L8Q8NGY9 312 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 HMGCLL1Q8TB92 370 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LMX1AQ8TE12 382 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SMPDL3AQ92484 453 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 MAELQ96JY0 434 aaKnown RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 ZC3H10Q96K80 434 aaKnown RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 MAGEB10Q96LZ2 347 aaPredicted RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 LRRC37BQ96QE4 947 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 CCDC28BQ9BUN5 200 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 XKR8Q9H6D3 395 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ERVMER34-1Q9H9K5 563 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ZSCAN32Q9NX65 697 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SPASTQ9UBP0 616 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PILRBQ9UKJ0 227 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ICKQ9UPZ9 632 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 BTRCQ9Y297 605 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ABCA7Q8IZY2 2146 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 KIR2DS5A0A0G2JLQ3 304 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 A0A0G2JNG1 304 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 KIR2DS3K7RE56 304 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 UGDHO60701 494 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 VIPP01282 170 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LINC00032P0C843 101 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SP9P0CG40 484 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SLC2A4P14672 509 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PKLRP30613 574 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 DOC2AQ14183 400 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 KIR2DS5Q14953 304 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 KIF19Q2TAC6 998 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LSM12Q3MHD2 195 aaKnown RBP10.85□□□□□ -0.67
USP3-218ENST00000560202 XKR6Q5GH73 641 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PRAMEF13Q5VWM6 474 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LIPJQ5W064 366 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 NXNQ6DKJ4 435 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 LCTLQ6UWM7 567 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 GKN2Q86XP6 184 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 TRIM48Q8IWZ4 208 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 NAGSQ8N159 534 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SFRP1Q8N474 314 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 PATE1Q8WXA2 126 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 NEIL2Q969S2 332 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SH3KBP1Q96B97 665 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 C3orf30Q96M34 536 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 FAM210AQ96ND0 272 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 CCT7Q99832 543 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 HAUS8Q9BT25 410 aa10.85□□□□□ -0.67
USP3-218ENST00000560202 SLC29A3Q9BZD2 475 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms