RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TOR1AIP2Q8NFQ8 470 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 MAPKAP1Q9BPZ7 522 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 TCEAL7Q9BRU2 100 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ACSS3Q9H6R3 686 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 C8BP07358 591 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CHIT1Q13231 466 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 SCARB2Q14108 478 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 UBQLNLQ8IYU4 475 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM110BQ8TC76 370 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 C7orf34Q96L11 122 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 DEFB129Q9H1M3 183 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 COQ10BQ9H8M1 238 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 PNO1Q9NRX1 252 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 NUFIP1Q9UHK0 495 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 INSRRP14616 1297 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CYP3A5P20815 502 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 NCBP2P52298 156 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 RTP1P59025 263 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ANKDD1AQ495B1 522 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCDC58Q4VC31 144 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 NKAPLQ5M9Q1 402 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 KIF18BQ86Y91 864 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF584Q8IVC4 421 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 FRZBQ92765 325 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 GHRLQ9UBU3 117 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 TLR6Q9Y2C9 796 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 OIP5O43482 229 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CAMLGP49069 296 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 RAB5CP51148 216 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLRN1P58418 232 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 SNTA1Q13424 505 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 TCRBV9S1A1TA0A576 114 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC22A2O15244 555 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 EDF1O60869 148 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 PARP15Q460N3 678 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 LRRC37A5PQ49AS3 106 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 RBM15BQ8NDT2 890 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CDRT1O95170 752 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 GOT1P17174 413 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 KCNJ5P48544 419 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPIAP49247 311 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 MVKQ03426 396 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CDK18Q07002 472 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 LY6KQ17RY6 165 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 GPRC6AQ5T6X5 926 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ELMOD2Q8IZ81 293 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 REPS2Q8NFH8 660 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 DPF1Q92782 380 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 PLA2G12BQ9BX93 195 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ICKQ9UPZ9 632 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 CAMSAP1Q5T5Y3 1602 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 C2orf72A6NCS6 295 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CREBL2O60519 120 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 WDPCPO95876 746 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ENTPD1P49961 510 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF45Q02386 682 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 NATD1Q8N6N6 113 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 GOLM1Q8NBJ4 401 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 TLR10Q9BXR5 811 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 NRCAMQ92823 1304 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ARGFXA6NJG6 315 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 PPP5CP53041 499 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF616Q08AN1 781 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CARD16Q5EG05 197 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMPRSS7Q7RTY8 843 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 OR5T1Q8NG75 326 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 OR10G2Q8NGC3 310 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 OSTF1Q92882 214 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF334Q9HCZ1 680 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 MAXP61244 160 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 FSTL1Q12841 308 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 RAB31Q13636 194 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 PCBP1Q15365 356 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 TSTQ16762 297 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 USP51Q70EK9 711 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 MAELQ96JY0 434 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC7A11Q9UPY5 501 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 C5orf60A6NFR6 353 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ACKR2O00590 384 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 BANF1O75531 89 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 AQP4P55087 323 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 BACE1P56817 501 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms