RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TTLL9Q3SXZ7 439 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 TRIM61Q5EBN2 209 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 WIPI1Q5MNZ9 446 aaPredicted RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 UGT3A1Q6NUS8 523 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ZC3H14Q6PJT7 736 aaKnown RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 SBSNQ6UWP8 590 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 FRA10AC1Q70Z53 315 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 UBE2R2Q712K3 238 aaPredicted RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 TAF8Q7Z7C8 310 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ATG4DQ86TL0 474 aaPredicted RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 ISCA2Q86U28 154 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 SLC22A15Q8IZD6 547 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 NKAPQ8N5F7 415 aaKnown RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 DCBLD1Q8N8Z6 715 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 KYQ8NBH2 561 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 FAM76AQ8TAV0 307 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ACMSDQ8TDX5 336 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 KIAA1191Q96A73 305 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 TMEM159Q96B96 161 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 PLPPR2Q96GM1 343 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 TMEM237Q96Q45 408 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 PKP4Q99569 1192 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 TMEM79Q9BSE2 394 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 TIMM29Q9BSF4 260 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 TSSK1BQ9BXA7 367 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 DERL2Q9GZP9 239 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 WNT10AQ9GZT5 417 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 IQCGQ9H095 443 aaKnown RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 ATG10Q9H0Y0 220 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 STMN4Q9H169 189 aaPredicted RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 TNFRSF12AQ9NP84 129 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 MKS1Q9NXB0 559 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 NCKIPSDQ9NZQ3 722 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.07□□□□□ -1.6
SPG11-220ENST00000559933 GMEB2Q9UKD1 530 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 GPR34Q9UPC5 381 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 PDE10AQ9Y233 779 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ASF1AQ9Y294 204 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 COMMD10Q9Y6G5 202 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 DGKBQ9Y6T7 804 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 PIEZO1Q92508 2521 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 ANKRD12Q6UB98 2062 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 MUC6Q6W4X9 2439 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 CACNA1HO95180 2353 aa5.07□□□□□ -1.6
SPG11-220ENST00000559933 QSOX1O00391 747 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PPP6CO00743 305 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 TNFRSF10CO14798 259 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 LIN7AO14910 233 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 TAPBPO15533 448 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 AQP9O43315 295 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ITM2AO43736 263 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 KERAO60938 352 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 MATN4O95460 622 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 C1orf105O95561 183 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 BPGMP07738 259 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 DHRS4L1P0CG22 281 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 GIMD1P0DJR0 217 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 MPC1LP0DKB6 136 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 MYL2P10916 166 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 FGF3P11487 239 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 MTHFD1P11586 935 aaKnown RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 CTSEP14091 401 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 GFAPP14136 432 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CPA3P15088 417 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ENGP17813 658 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CD9P21926 228 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 KELP23276 732 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PSMB5P28074 263 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 IMPA1P29218 277 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 EPHA8P29322 1005 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 EEF1DP29692 281 aaKnown RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 NTF4P34130 210 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 NUDT1P36639 197 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CD96P40200 585 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 GDF5P43026 501 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 HSPA7P48741 367 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 RGS4P49798 205 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PPP1CAP62136 330 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 DMPKQ09013 629 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 GPS2Q13227 327 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 TSTA3Q13630 321 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 GRB7Q14451 532 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ACAP2Q15057 778 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 TGFBIQ15582 683 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CHI3L2Q15782 390 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 RPE65Q16518 533 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PFKFB4Q16877 469 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 FAM83EQ2M2I3 478 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 HLA-BQ31612 363 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SFRP5Q5T4F7 317 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 AGAP9Q5VTM2 703 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 HHATQ5VTY9 493 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SLC23A3Q6PIS1 610 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ZYG11AQ6WRX3 759 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms