RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF254O75437 659 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 USP1O94782 785 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TNFAIP8O95379 198 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 IL18BPO95998 194 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 GSRP00390 522 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ATP5BP06576 529 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 DLDP09622 509 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 VCLP18206 1134 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 POLR2CP19387 275 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 PRKCHP24723 683 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ADRA1DP25100 572 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 NNMTP40261 264 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CSNK1DP48730 415 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SNRPD1P62314 119 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 DBPQ10586 325 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TRAP1Q12931 704 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TRAF2Q12933 501 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 HTR4Q13639 388 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 GALNT3Q14435 633 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TMED2Q15363 201 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 MAPRE2Q15555 327 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 DLG2Q15700 870 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ITPRIPL2Q3MIP1 535 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CEP78Q5JTW2 689 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 DGKKQ5KSL6 1271 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SLX4IPQ5VYV7 408 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 FAM91A1Q658Y4 838 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TMEM215Q68D42 235 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CES3Q6UWW8 571 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TMEM135Q86UB9 458 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 RASSF3Q86WH2 238 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CTAGE3PQ8IX95 158 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 PAF1Q8N7H5 531 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 LPCAT1Q8NF37 534 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 OR2AP1Q8NGE2 309 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 OR6K2Q8NGY2 324 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 PDCD6IPQ8WUM4 868 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SORCS1Q8WY21 1168 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TRIB3Q96RU7 358 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 RPP25Q9BUL9 199 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 KIFC1Q9BW19 673 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ADGRE3Q9BY15 652 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 MRPL1Q9BYD6 325 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ATP13A3Q9H7F0 1226 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 MRM3Q9HC36 420 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 GTSE1Q9NYZ3 720 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 KCNN3Q9UGI6 736 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 FETUBQ9UGM5 382 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 RSL24D1Q9UHA3 163 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 EVLQ9UI08 416 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SLC24A2Q9UI40 661 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SLCO3A1Q9UIG8 710 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 TCAF1Q9Y4C2 921 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 ANKRD36A6QL64 1941 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 MYLKQ15746 1914 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 FAM159BA6NKW6 160 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 C1QTNF3-AMACRE9PGA6 284 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ANHXE9PGG2 379 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 H0Y858 1186 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 MBTPS2O43462 519 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 BUD23O43709 281 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ITM2AO43736 263 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 SOCS5O75159 536 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ZNF821O75541 412 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CIB2O75838 187 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 SULT1C4O75897 302 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PIAS1O75925 651 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PGLSO95336 258 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PIGNO95427 931 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 STAMBPO95630 424 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PRLP01236 227 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PRKCGP05129 697 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 SRPRAP08240 638 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 INHBAP08476 426 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 DDX5P17844 614 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CDH2P19022 906 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 NMBRP28336 390 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 GCAP28676 217 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 SERPINA4P29622 427 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 GJA4P35212 333 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 NUDT1P36639 197 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 EIF2DP41214 584 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 EPHB1P54762 984 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 C21orf59P57076 290 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ST8SIA6P61647 398 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 IL9RQ01113 521 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 RAD51Q06609 339 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 BCL2L1Q07817 233 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 APOFQ13790 326 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 FRG1Q14331 258 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms