RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAF2Q96CS3 445 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 SLC45A3Q96JT2 553 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 BIRC8Q96P09 236 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 TTC1Q99614 292 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 EBNA1BP2Q99848 306 aaKnown RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 FAM118BQ9BPY3 351 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 ZNF670Q9BS34 389 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 BRD8Q9H0E9 1235 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 ADNPQ9H2P0 1102 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 SARS2Q9NP81 518 aaKnown RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 TBCCD1Q9NVR7 557 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 MOCS1Q9NZB8 636 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 SCHIP1Q9P0W5 487 aaPredicted RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 ARMCX1Q9P291 453 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 SLC23A2Q9UGH3 650 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 TUBD1Q9UJT1 453 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 ITGB1BP2Q9UKP3 347 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 TMPRSS11EQ9UL52 423 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 DTNAQ9Y4J8 743 aa5.73□□□□□ -1.49
USP3-212ENST00000559276 TMEM184BQ9Y519 407 aaPredicted RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 HEMK1Q9Y5R4 338 aaPredicted RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 MRPS18BQ9Y676 258 aaKnown RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 MN1Q10571 1320 aaPredicted RBP5.73□□□□□ -1.49
USP3-212ENST00000559276 APOL1O14791 398 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 NUAK1O60285 661 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 C9P02748 559 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ZCCHC18P0CG32 403 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ACP5P13686 325 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 F3P13726 295 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ZNF30P17039 623 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 CCNCP24863 283 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 CSTF2P33240 577 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP3-212ENST00000559276 STAT5AP42229 794 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SLC1A6P48664 564 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SPINT3P49223 89 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 GFERP55789 205 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 UBE2IP63279 158 aaKnown RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 TUBA4AP68366 448 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 FOXK1P85037 733 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 HHEXQ03014 270 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 CDC20Q12834 499 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 NFATC2Q13469 925 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 DCTN2Q13561 401 aaKnown RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 SEMA5AQ13591 1074 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 CCNIQ14094 377 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 KRT81Q14533 505 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 TRIP10Q15642 601 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SNAP47Q5SQN1 464 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 HP1BP3Q5SSJ5 553 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 DCAF12Q5T6F0 453 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 TEDDM1Q5T9Z0 273 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SLC9A4Q6AI14 798 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RAPH1Q70E73 1250 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 CHST15Q7LFX5 561 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 FAM129CQ86XR2 697 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 GALNT13Q8IUC8 556 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ZNF547Q8IVP9 402 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RAVER1Q8IY67 606 aaKnown RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 NRSN1Q8IZ57 195 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 NLGN4XQ8N0W4 816 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 NDUFAF2Q8N183 169 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP3-212ENST00000559276 IL22RA1Q8N6P7 574 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 PAF1Q8N7H5 531 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 GPR26Q8NDV2 337 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 NLGN4YQ8NFZ3 816 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 RDH11Q8TC12 318 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SLC26A7Q8TE54 656 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 TADA1Q96BN2 335 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RNF31Q96EP0 1072 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 LRGUKQ96M69 825 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 TSGA13Q96PP4 275 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RNF157Q96PX1 679 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 PLEKHG4BQ96PX9 1271 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 TRIB3Q96RU7 358 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SLC38A3Q99624 504 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 DPYSL5Q9BPU6 564 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 ASPSCR1Q9BZE9 553 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 POLR1EQ9GZS1 481 aaKnown RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 MRM3Q9HC36 420 aaKnown RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 PRDM8Q9NQV8 689 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 C8orf4Q9NR00 106 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 FBXO8Q9NRD0 319 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RAB6BQ9NRW1 208 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 RBM22Q9NW64 420 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP3-212ENST00000559276 AKAP7Q9P0M2 348 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 ZNF624Q9P2J8 865 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 RCOR3Q9P2K3 495 aaPredicted RBP5.72□□□□□ -1.49
USP3-212ENST00000559276 ZNHIT2Q9UHR6 403 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 POMPQ9Y244 141 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 KCNK6Q9Y257 313 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 SLC30A1Q9Y6M5 507 aa5.72□□□□□ -1.49
USP3-212ENST00000559276 PCSK5Q92824 1860 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 C1orf232A0A0U1RR37 186 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 TCRBV7S3A2A0A539 114 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 ZNF891A8MT65 544 aaPredicted RBP5.71□□□□□ -1.5
USP3-212ENST00000559276 ANKRD66B4E2M5 251 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 H7C0C1 242 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 KCNK1O00180 336 aa5.71□□□□□ -1.5
USP3-212ENST00000559276 AP3B1O00203 1094 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms