RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 IL11RAQ14626 422 aa18■□□□□ 0.47
CASC4-209ENST00000559222 LARP7Q4G0J3 582 aaKnown RBP eCLIP18■□□□□ 0.47
CASC4-209ENST00000559222 TMTC4Q5T4D3 741 aa18■□□□□ 0.47
CASC4-209ENST00000559222 GRTP1Q5TC63 336 aa18■□□□□ 0.47
CASC4-209ENST00000559222 LRRC69Q6ZNQ3 347 aa18■□□□□ 0.47
CASC4-209ENST00000559222 DNAJC22Q8N4W6 341 aa18■□□□□ 0.47
CASC4-209ENST00000559222 SLC38A9Q8NBW4 561 aa18■□□□□ 0.47
CASC4-209ENST00000559222 OR2L3Q8NG85 312 aa18■□□□□ 0.47
CASC4-209ENST00000559222 FCRL4Q96PJ5 515 aa18■□□□□ 0.47
CASC4-209ENST00000559222 FUT8Q9BYC5 575 aa18■□□□□ 0.47
CASC4-209ENST00000559222 ACSS3Q9H6R3 686 aa18■□□□□ 0.47
CASC4-209ENST00000559222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18■□□□□ 0.47
CASC4-209ENST00000559222 TAC3Q9UHF0 121 aa18■□□□□ 0.47
CASC4-209ENST00000559222 LNPEPQ9UIQ6 1025 aa18■□□□□ 0.47
CASC4-209ENST00000559222 IGKV1-8A0A0C4DH67 115 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 H3BMH7 237 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 CTSVO60911 334 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 CYP2A7P20853 494 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 POU4F1Q01851 419 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 SP140Q13342 867 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 SLMAPQ14BN4 828 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 ZKSCAN8Q15776 578 aaPredicted RBP17.99■□□□□ 0.47
CASC4-209ENST00000559222 UAP1Q16222 522 aaPredicted RBP17.99■□□□□ 0.47
CASC4-209ENST00000559222 PPP1R3AQ16821 1122 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 LRRC8EQ6NSJ5 796 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 FIGLAQ6QHK4 219 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 SYTL1Q8IYJ3 562 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 RAB42Q8N4Z0 105 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 SMPDL3AQ92484 453 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 TXLNGYQ9BZA5 131 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 DPH1Q9BZG8 443 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 SPRTNQ9H040 489 aaPredicted RBP17.99■□□□□ 0.47
CASC4-209ENST00000559222 ATG10Q9H0Y0 220 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 ANKZF1Q9H8Y5 726 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 PARVBQ9HBI1 364 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 GPAMQ9HCL2 828 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 UTP6Q9NYH9 597 aaKnown RBP17.99■□□□□ 0.47
CASC4-209ENST00000559222 FAM208BQ5VWN6 2430 aa17.99■□□□□ 0.47
CASC4-209ENST00000559222 MDC1Q14676 2089 aaKnown RBP17.99■□□□□ 0.47
CASC4-209ENST00000559222 LOC101059948A0A1B0GTJ6 334 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 SLC16A5O15375 505 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 SPRP35270 261 aaPredicted RBP17.98■□□□□ 0.47
CASC4-209ENST00000559222 TBPL1P62380 186 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 DLG1Q12959 904 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 NAB1Q13506 487 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 ARHGAP19Q14CB8 494 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 TSNQ15631 228 aaKnown RBP17.98■□□□□ 0.47
CASC4-209ENST00000559222 CACNA2D3Q8IZS8 1091 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 SLC22A18Q96BI1 424 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 TCTN2Q96GX1 697 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 PDLIM5Q96HC4 596 aaKnown RBP17.98■□□□□ 0.47
CASC4-209ENST00000559222 RUFY1Q96T51 708 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 ZPBPQ9BS86 351 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 EPB41L4BQ9H329 900 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 POPDC3Q9HBV1 291 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 CUEDC1Q9NWM3 386 aaPredicted RBP17.98■□□□□ 0.47
CASC4-209ENST00000559222 DSPP15924 2871 aaKnown RBP17.98■□□□□ 0.47
CASC4-209ENST00000559222 PTPRQQ9UMZ3 2332 aa17.98■□□□□ 0.47
CASC4-209ENST00000559222 SCRG1O75711 98 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 GUCA1CO95843 209 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 SLC35E2BP0CK96 405 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 LIFP15018 202 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 F8A1P23610 371 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 PHBP35232 272 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 RPA3P35244 121 aaPredicted RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 SLC12A2P55011 1212 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 IRF9Q00978 393 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 GPS2Q13227 327 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 C18orf21Q32NC0 220 aaPredicted RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 MROH9Q5TGP6 573 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 LCN10Q6JVE6 187 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 AGTRAPQ6RW13 159 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 TMEM126BQ8IUX1 230 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 NLGN4XQ8N0W4 816 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 NKAPQ8N5F7 415 aaKnown RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 NLGN4YQ8NFZ3 816 aaPredicted RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 MCOLN3Q8TDD5 553 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 ALKBH8Q96BT7 664 aaKnown RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 PTERQ96BW5 349 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 CYTH2Q99418 400 aa17.97■□□□□ 0.47
CASC4-209ENST00000559222 RALYQ9UKM9 306 aaKnown RBP17.97■□□□□ 0.47
CASC4-209ENST00000559222 MSL3P1P0C860 447 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 CCDC166P0CW27 439 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 STMN1P16949 149 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 CSRP3P50461 194 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 RAB10P61026 200 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 CXADRP78310 365 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 NAE1Q13564 534 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 OR4D1Q15615 310 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 MANEAQ5SRI9 462 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 ICE2Q659A1 982 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 FRMPD2BQ6IN97 320 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 FAM199XQ6PEV8 388 aaPredicted RBP17.96■□□□□ 0.47
CASC4-209ENST00000559222 C6orf15Q6UXA7 325 aaPredicted RBP17.96■□□□□ 0.47
CASC4-209ENST00000559222 SLC44A1Q8WWI5 657 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 PYCR2Q96C36 320 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 MED8Q96G25 268 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 CCDC138Q96M89 665 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms