RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 DLATP10515 647 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 SAGP10523 405 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 UROSP10746 265 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 MSH3P20585 1137 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PSMA3P25788 255 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 MAGEB1P43366 347 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 OR3A1P47881 315 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ALDH3A2P51648 485 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ZNF132P52740 706 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PDX1P52945 283 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 MFAP3P55082 362 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 DSCR9P59020 149 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SEC61A1P61619 476 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 ST8SIA6P61647 398 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RPS18P62269 152 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 ASIC1P78348 528 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 TAF10Q12962 218 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SQLEQ14534 574 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PKN2Q16513 984 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 CDC37Q16543 378 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 DUOXA1Q1HG43 343 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SMU1Q2TAY7 513 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ITPRIPL2Q3MIP1 535 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SLC25A53Q5H9E4 307 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PRAMEF8Q5VWM4 474 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 FAM46CQ5VWP2 391 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CAPRIN2Q6IMN6 1127 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 FAM166AQ6J272 317 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 C11orf63Q6NUN7 778 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 FAM122CQ6P4D5 195 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CASC4Q6P4E1 433 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ALKBH5Q6P6C2 394 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 C11orf88Q6PI97 169 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 LINGO4Q6UY18 593 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ZNF852Q6ZMS4 543 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RAPH1Q70E73 1250 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ANKRD33Q7Z3H0 272 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 CCDC83Q8IWF9 413 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CNTN4Q8IWV2 1026 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 UNC45BQ8IWX7 931 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 TIGD4Q8IY51 512 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CDK20Q8IZL9 346 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 IQCF1Q8N6M8 205 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 C10orf53Q8N6V4 93 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RASGEF1AQ8N9B8 481 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 KIAA0895Q8NCT3 520 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SLC24A4Q8NFF2 622 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 OR2T12Q8NG77 320 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 OR7G3Q8NG95 312 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 OR4K1Q8NGD4 311 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 C9orf43Q8TAL5 461 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 LNX1Q8TBB1 728 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 RNASE8Q8TDE3 154 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 SAP25Q8TEE9 199 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ZNF473Q8WTR7 871 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 SECTM1Q8WVN6 248 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 FAM46BQ96A09 425 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PYCR2Q96C36 320 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RTP4Q96DX8 246 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ALG14Q96F25 216 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PDLIM5Q96HC4 596 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 AK8Q96MA6 479 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SPATA13Q96N96 652 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ZNF583Q96ND8 569 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 IL17FQ96PD4 163 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 KLHL5Q96PQ7 755 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PKP4Q99569 1192 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RTP3Q9BQQ7 232 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PRRG4Q9BZD6 226 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ZNF350Q9GZX5 532 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 LAT2Q9GZY6 243 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 LSG1Q9H089 658 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 SHARPINQ9H0F6 387 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 P2RY12Q9H244 342 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SNX25Q9H3E2 840 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RETREG1Q9H6L5 497 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 TMEM206Q9H813 350 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SRD5A3Q9H8P0 318 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 EBF2Q9HAK2 575 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 APOBEC3GQ9HC16 384 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 DNAJC17Q9NVM6 304 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 ADPRHL2Q9NX46 363 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 STK26Q9P289 416 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CACNG4Q9UBN1 327 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 FAF1Q9UNN5 650 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 PROCRQ9UNN8 238 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 GPR132Q9UNW8 380 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 NME7Q9Y5B8 376 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 KIAA1210Q9ULL0 1709 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 ABCC9O60706 1549 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 SCN5AQ14524 2016 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 TRAV24A0A0B4J272 114 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 LRRD1A4D1F6 860 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 C17orf105B2RV13 164 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 KBTBD13C9JR72 458 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 F8VVB4 439 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 F8VWA3 439 aa1.51□□□□□ -2.17
USP3-209ENST00000558925 DDX39AO00148 427 aaKnown RBP1.51□□□□□ -2.17
USP3-209ENST00000558925 SLC33A1O00400 549 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms