RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 FIGLAQ6QHK4 219 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 C6orf15Q6UXA7 325 aaPredicted RBP13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 CCDC81Q6ZN84 652 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 CYS1Q717R9 158 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 LRRC56Q8IYG6 542 aaPredicted RBP13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 MYO1HQ8N1T3 1032 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 UHMK1Q8TAS1 419 aaKnown RBP13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 CDKL2Q92772 493 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 TCTN2Q96GX1 697 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 RUFY1Q96T51 708 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 ATG10Q9H0Y0 220 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 STARD5Q9NSY2 213 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 IL17BQ9UHF5 180 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
TSPAN3-205ENST00000558745 PCM1Q15154 2024 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 EIF3FO00303 357 aaPredicted RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 ERGP11308 486 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 IMPA1P29218 277 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 ATP1A2P50993 1020 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 TMEM126BQ8IUX1 230 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 SYTL1Q8IYJ3 562 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 FBXO15Q8NCQ5 510 aaPredicted RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 OR2L3Q8NG85 312 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 HMGCLL1Q8TB92 370 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 SMPDL3AQ92484 453 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 SLC22A18Q96BI1 424 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 ALKBH8Q96BT7 664 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 RBBP8Q99708 897 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 CPNE1Q99829 537 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 RAB11FIP5Q9BXF6 653 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 PARVBQ9HBI1 364 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 SLC6A20Q9NP91 592 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 NSMCE4AQ9NXX6 385 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 UTP6Q9NYH9 597 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 STOX2Q9P2F5 926 aaPredicted RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 MTRF1LQ9UGC7 380 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 TAC3Q9UHF0 121 aa13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
TSPAN3-205ENST00000558745 NPEPPSL1A6NEC2 478 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 MAP3K7O43318 606 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 ZNF749O43361 778 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 CTSVO60911 334 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 ACSL3O95573 720 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GUCA1CO95843 209 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 RPA3P35244 121 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GP5P40197 560 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 TMPRSS3P57727 454 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 VAC14Q08AM6 782 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GPS2Q13227 327 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GRTP1Q5TC63 336 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 CMC1Q7Z7K0 106 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 MCATQ8IVS2 390 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 FMO2Q99518 471 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 DPH7Q9BTV6 452 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 GPAMQ9HCL2 828 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 CUEDC1Q9NWM3 386 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
TSPAN3-205ENST00000558745 IGKV1-8A0A0C4DH67 115 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 A0A0J9YVX5 310 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 H3BMH7 237 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 K7ENP7 123 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 SLC16A5O15375 505 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 NKX2-8O15522 239 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 WISP3O95389 354 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 C8GP07360 202 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 FAM153BP0C7A2 387 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 TCN2P20062 427 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 CYP2A7P20853 494 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 STX2P32856 288 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 DLSTP36957 453 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 ITGA1P56199 1179 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 POU4F1Q01851 419 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 NAE1Q13564 534 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 FAM153CQ494X1 144 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 FRMPD2BQ6IN97 320 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 INO80CQ6PI98 192 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 BPHLQ86WA6 291 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 PLD3Q8IV08 490 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 IFT20Q8IY31 132 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 ESX1Q8N693 406 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 ZNF655Q8N720 491 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 CT55Q8WUE5 264 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms