RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PSMA6P60900 246 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 PON2Q15165 354 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZBED5Q49AG3 693 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 POTEHQ6S545 545 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 GPR151Q8TDV0 419 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 RBM18Q96H35 190 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZNF226Q9NYT6 803 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TAS2R1Q9NYW7 299 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 GSKIPQ9P0R6 139 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TLL2Q9Y6L7 1015 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 PDCD5O14737 125 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SCELO95171 688 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 VAMP1P23763 118 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CSKP41240 450 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CAPZA1P52907 286 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 RBM48Q5RL73 367 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 METTL21CQ5VZV1 264 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 FSTL4Q6MZW2 842 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 FUT10Q6P4F1 479 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 OXR1Q8N573 874 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ITFG2Q969R8 447 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 GPR20Q99678 358 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZNF717Q9BY31 904 aaPredicted RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 ADAM7Q9H2U9 754 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CCDC177Q9NQR7 707 aaPredicted RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 NOP16Q9Y3C1 178 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZNF705EA8MWA4 302 aaPredicted RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 GRXCR1A8MXD5 290 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ASLP04424 464 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 FOXN2P32314 431 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZNF81P51508 661 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TMEM198Q66K66 360 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 PIGWQ7Z7B1 504 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SLC7A6OSQ96CW6 309 aaPredicted RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 ZDHHC4Q9NPG8 344 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SLC39A1Q9NY26 324 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ITM2AO43736 263 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 INHAP05111 366 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 FGF1P05230 155 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 IL7RP16871 459 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ZNF16P17020 682 aaPredicted RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 CREMQ03060 361 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 GPR68Q15743 365 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 MON1AQ86VX9 555 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 UNC5BQ8IZJ1 945 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 MYBPHLA2RUH7 354 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 GPR89AB7ZAQ6 455 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 BHMG1C9JSJ3 638 aaPredicted RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 GPR89BP0CG08 455 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 EDNRAP25101 427 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 OR12D2P58182 307 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ADAM15Q13444 863 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ARFRP1Q13795 201 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 TGFBIQ15582 683 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 VMACQ2NL98 169 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 IFI44LQ53G44 452 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 VTCN1Q7Z7D3 282 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 C8orf48Q96LL4 319 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 COPS7AQ9UBW8 275 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 SMPD1P17405 629 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 LIMK2P53671 638 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 RHBDL3P58872 404 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 CAP1Q01518 475 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 CHIT1Q13231 466 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 PUS10Q3MIT2 529 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 OR8S1Q8NH09 359 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 C10orf82Q8WW14 230 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ROPN1LQ96C74 230 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 PKP2Q99959 881 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 RIOK2Q9BVS4 552 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 ZNF878C9JN71 531 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 ACADVLP49748 655 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 XKP51811 444 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 AP1S1P61966 158 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ID2Q02363 134 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 OLIG2Q13516 323 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 KLHL22Q53GT1 634 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ARSHQ5FYA8 562 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 HFE2Q6ZVN8 426 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 POP5Q969H6 163 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 DNAJC19Q96DA6 116 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 DNAJB9Q9UBS3 223 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 MRPS33Q9Y291 106 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 MSCO60682 206 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 LCN1P31025 176 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 GDI1P31150 447 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ELMOD2Q8IZ81 293 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ITPAQ9BY32 194 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 CENPMQ9NSP4 180 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms