RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TBCCQ15814 346 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 CSRP2Q16527 193 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 RBBP7Q16576 425 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 UNC50Q53HI1 259 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 PRAMEF13Q5VWM6 474 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 LIPJQ5W064 366 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 DUS1LQ6P1R4 473 aaKnown RBP12.01□□□□□ -0.49
TPM1-209ENST00000558072 C17orf64Q86WR6 236 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 CARFQ8N187 725 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 SLC25A45Q8N413 288 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 MINDY1Q8N5J2 469 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 SNX31Q8N9S9 440 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 OR10G6Q8NH81 332 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 PATE1Q8WXA2 126 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 REPS1Q96D71 796 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 NRTNQ99748 197 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 IPPKQ9H8X2 491 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 ANKMY1Q9P2S6 941 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 ADGRE2Q9UHX3 823 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 KNL1Q8NG31 2342 aa12□□□□□ -0.49
TPM1-209ENST00000558072 VPS13AQ96RL7 3174 aa12□□□□□ -0.49
TPM1-209ENST00000558072 TRBV23OR9-2A0A075B6M9 112 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PIPSLA2A3N6 862 aa12□□□□□ -0.49
TPM1-209ENST00000558072 CLDN9O95484 217 aa12□□□□□ -0.49
TPM1-209ENST00000558072 ESRRBO95718 433 aa12□□□□□ -0.49
TPM1-209ENST00000558072 FGF4P08620 206 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PCSK2P16519 638 aa12□□□□□ -0.49
TPM1-209ENST00000558072 GSTM2P28161 218 aa12□□□□□ -0.49
TPM1-209ENST00000558072 CMPK1P30085 196 aa12□□□□□ -0.49
TPM1-209ENST00000558072 SERPINB1P30740 379 aa12□□□□□ -0.49
TPM1-209ENST00000558072 ARL1P40616 181 aaPredicted RBP12□□□□□ -0.49
TPM1-209ENST00000558072 RPL14P50914 215 aaKnown RBP12□□□□□ -0.49
TPM1-209ENST00000558072 TBPL1P62380 186 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PHEXP78562 749 aa12□□□□□ -0.49
TPM1-209ENST00000558072 IRF8Q02556 426 aa12□□□□□ -0.49
TPM1-209ENST00000558072 GPR18Q14330 331 aa12□□□□□ -0.49
TPM1-209ENST00000558072 GRB7Q14451 532 aa12□□□□□ -0.49
TPM1-209ENST00000558072 ARL13AQ5H913 290 aaPredicted RBP12□□□□□ -0.49
TPM1-209ENST00000558072 GPRIN3Q6ZVF9 776 aa12□□□□□ -0.49
TPM1-209ENST00000558072 KANSL1Q7Z3B3 1105 aa12□□□□□ -0.49
TPM1-209ENST00000558072 GOLGA7Q7Z5G4 137 aa12□□□□□ -0.49
TPM1-209ENST00000558072 MILR1Q7Z6M3 343 aa12□□□□□ -0.49
TPM1-209ENST00000558072 CPLX4Q7Z7G2 160 aa12□□□□□ -0.49
TPM1-209ENST00000558072 CLYBLQ8N0X4 340 aa12□□□□□ -0.49
TPM1-209ENST00000558072 KRT78Q8N1N4 520 aa12□□□□□ -0.49
TPM1-209ENST00000558072 WDR48Q8TAF3 677 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PIWIL2Q8TC59 973 aaKnown RBP12□□□□□ -0.49
TPM1-209ENST00000558072 CCT6BQ92526 530 aa12□□□□□ -0.49
TPM1-209ENST00000558072 AHCYL2Q96HN2 611 aaKnown RBP12□□□□□ -0.49
TPM1-209ENST00000558072 SEC16BQ96JE7 1060 aa12□□□□□ -0.49
TPM1-209ENST00000558072 CD180Q99467 661 aa12□□□□□ -0.49
TPM1-209ENST00000558072 TMEM79Q9BSE2 394 aa12□□□□□ -0.49
TPM1-209ENST00000558072 EFCAB11Q9BUY7 163 aa12□□□□□ -0.49
TPM1-209ENST00000558072 SLC29A3Q9BZD2 475 aa12□□□□□ -0.49
TPM1-209ENST00000558072 RAB33BQ9H082 229 aa12□□□□□ -0.49
TPM1-209ENST00000558072 ATG10Q9H0Y0 220 aa12□□□□□ -0.49
TPM1-209ENST00000558072 GSTO2Q9H4Y5 243 aa12□□□□□ -0.49
TPM1-209ENST00000558072 NOL11Q9H8H0 719 aaKnown RBP12□□□□□ -0.49
TPM1-209ENST00000558072 ACTR8Q9H981 624 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PELI2Q9HAT8 420 aa12□□□□□ -0.49
TPM1-209ENST00000558072 TMEM9BQ9NQ34 198 aa12□□□□□ -0.49
TPM1-209ENST00000558072 SEMA4GQ9NTN9 838 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PSD3Q9NYI0 1048 aa12□□□□□ -0.49
TPM1-209ENST00000558072 TRPS1Q9UHF7 1281 aa12□□□□□ -0.49
TPM1-209ENST00000558072 HAO1Q9UJM8 370 aa12□□□□□ -0.49
TPM1-209ENST00000558072 PADI4Q9UM07 663 aa12□□□□□ -0.49
TPM1-209ENST00000558072 SLC22A14Q9Y267 594 aa12□□□□□ -0.49
TPM1-209ENST00000558072 MUC6Q6W4X9 2439 aa12□□□□□ -0.49
TPM1-209ENST00000558072 TRPC5OSA6NMA1 111 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 EDF1O60869 148 aaKnown RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 SHOX2O60902 331 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 UBXN7O94888 489 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 SIX3O95343 332 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 KRT6AP02538 564 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 KRT6BP04259 564 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 CHRM5P08912 532 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 TGM1P22735 817 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 CASP2P42575 452 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 KRT6CP48668 564 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 AGTR2P50052 363 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 OCRLQ01968 901 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 PRDX1Q06830 199 aaKnown RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 TSTA3Q13630 321 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 NR1D2Q14995 579 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 GGTA1PQ4G0N0 100 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 DBX2Q6ZNG2 339 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 PRR23CQ6ZRP0 262 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 ZCCHC23Q6ZST2 131 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 ZNF438Q7Z4V0 828 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 CUZD1Q86UP6 607 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 TTLQ8NG68 377 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 OR4E2Q8NGC2 313 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 TRPC4APQ8TEL6 797 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 SLC5A11Q8WWX8 675 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 JPH3Q8WXH2 748 aaPredicted RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 PTCD3Q96EY7 689 aaKnown RBP11.99□□□□□ -0.49
TPM1-209ENST00000558072 ZDHHC12Q96GR4 267 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 AIF1LQ9BQI0 150 aa11.99□□□□□ -0.49
TPM1-209ENST00000558072 MENTQ9BUN1 341 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms