RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 AGR3Q8TD06 166 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 SAP25Q8TEE9 199 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 SLC22A18Q96BI1 424 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 OR4K3Q96R72 315 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 NPHS2Q9NP85 383 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 PNPOQ9NVS9 261 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 MARCOQ9UEW3 520 aaPredicted RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 TRPS1Q9UHF7 1281 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 ZDHHC2Q9UIJ5 367 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 TRAF6Q9Y4K3 522 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 PCDHB11Q9Y5F2 797 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 ZNF318Q5VUA4 2279 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 CACNA1EQ15878 2313 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 MUC3AQ02505 3323 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 PCDH15Q96QU1 1955 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 LILRA5A6NI73 299 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 PPP6CO00743 305 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 NDUFAB1O14561 156 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 AZIN1O14977 448 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 OR4F21O95013 312 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 CCNDBP1O95273 360 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 CLDN9O95484 217 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 CHEK2O96017 543 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 CHRM5P08912 532 aaPredicted RBP16.3■□□□□ 0.2
SNX1-203ENST00000558040 HGFP14210 728 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 NPPBP16860 134 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 ENGP17813 658 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 EPORP19235 508 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 IRF8Q02556 426 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 PCDH1Q08174 1060 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 GGTA1PQ4G0N0 100 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 ZCCHC8Q6NZY4 707 aaKnown RBP16.3■□□□□ 0.2
SNX1-203ENST00000558040 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 KANSL1Q7Z3B3 1105 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 SPATA21Q7Z572 469 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 C17orf64Q86WR6 236 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 LINC01555Q8NAE3 123 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 KYQ8NBH2 561 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 OR4F6Q8NGB9 312 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 SLC5A11Q8WWX8 675 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 ELAC2Q9BQ52 826 aaKnown RBP16.3■□□□□ 0.2
SNX1-203ENST00000558040 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 IL21RQ9HBE5 538 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 PFDN4Q9NQP4 134 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 KLHL14Q9P2G3 628 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 TAC3Q9UHF0 121 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 USH1CQ9Y6N9 552 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 SDK1Q7Z5N4 2213 aa16.3■□□□□ 0.2
SNX1-203ENST00000558040 ARHGEF17Q96PE2 2063 aaPredicted RBP16.3■□□□□ 0.2
SNX1-203ENST00000558040 RHPN2P1A8MT19 583 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 HDAC3O15379 428 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 PCDHGA12O60330 932 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 UROSP10746 265 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 HMOX2P30519 316 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 PI4KAP42356 2102 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 ERVPABLB-1P60509 514 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 ABATP80404 500 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
SNX1-203ENST00000558040 TCF15Q12870 199 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 CHIT1Q13231 466 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 CCDC6Q16204 474 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 XKR6Q5GH73 641 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
SNX1-203ENST00000558040 LIPJQ5W064 366 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 KANK2Q63ZY3 851 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 CGB2Q6NT52 195 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 LETMD1Q6P1Q0 360 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 GATAD2AQ86YP4 633 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 MYLK4Q86YV6 388 aaPredicted RBP16.29■□□□□ 0.2
SNX1-203ENST00000558040 L3MBTL4Q8NA19 623 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 PRSS33Q8NF86 280 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 OR4C6Q8NH72 309 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 JPH3Q8WXH2 748 aaPredicted RBP16.29■□□□□ 0.2
SNX1-203ENST00000558040 CDK15Q96Q40 435 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 SLC38A3Q99624 504 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 SLC29A3Q9BZD2 475 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 EHD1Q9H4M9 534 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 ENTPD2Q9Y5L3 495 aa16.29■□□□□ 0.2
SNX1-203ENST00000558040 A0A1W2PPV9 198 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 PIPSLA2A3N6 862 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 TRPC5OSA6NMA1 111 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ISM1B1AKI9 464 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 E7EQ34 232 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 MATN2O00339 956 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 NUDT21O43809 227 aaKnown RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 SNX3O60493 162 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ZNF883P0CG24 379 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 GIMD1P0DJR0 217 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ALOX15P16050 662 aaPredicted RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 HNF4AP41235 474 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 SUZ12Q15022 739 aaKnown RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 TBCCQ15814 346 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 INAVAQ3KP66 663 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms