RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 MCOLN3Q8TDD5 553 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 SMPDL3AQ92484 453 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 MR1Q95460 341 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 HIST1H2AHQ96KK5 128 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 HIST1H2AJQ99878 128 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 H2AFJQ9BTM1 129 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 TRIM54Q9BYV2 358 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 ACTR5Q9H9F9 607 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-207ENST00000556831 TXLNGQ9NUQ3 528 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 PLCL2Q9UPR0 1127 aa13.58□□□□□ -0.24
SLIRP-207ENST00000556831 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 KRT87PA6NCN2 255 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 ERVH48-1M5A8F1 160 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 MYO1CO00159 1063 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 KATNA1O75449 491 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 TIAF1O95411 115 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 PEBP1P30086 187 aaKnown RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 STX2P32856 288 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 PNLIPRP1P54315 467 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 RPS15P62841 145 aaKnown RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 SLC7A5Q01650 507 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 GRB7Q14451 532 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 DEFB110Q30KQ9 67 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 RBM20Q5T481 1227 aaKnown RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 CTAGE3PQ8IX95 158 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 FBXO15Q8NCQ5 510 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 OR1L3Q8NH93 324 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 DENND1AQ8TEH3 1009 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 ASB11Q8WXH4 323 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 STARD8Q92502 1023 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 MIPEPQ99797 713 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 C17orf62Q9BQA9 187 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 WDR83Q9BRX9 315 aaKnown RBP13.57□□□□□ -0.24
SLIRP-207ENST00000556831 LRRC1Q9BTT6 524 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 MENTQ9BUN1 341 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 CHRNA10Q9GZZ6 450 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 LHX9Q9NQ69 397 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 ABCF3Q9NUQ8 709 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 SRPK3Q9UPE1 567 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 VWA7Q9Y334 891 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 AP1M2Q9Y6Q5 423 aa13.57□□□□□ -0.24
SLIRP-207ENST00000556831 FAM95CA0A1B0GW59 222 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 ESYT3A0FGR9 886 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 C21orf140B9A014 251 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 C9J4A7 227 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 TP73O15350 636 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-207ENST00000556831 TCN2P20062 427 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 AGXTP21549 392 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 SSTR1P30872 391 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 CDKN2DP55273 166 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 CYP4F2P78329 520 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 CYP2A13Q16696 494 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 TLDC1Q6P9B6 456 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 PAQR3Q6TCH7 311 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 C3orf62Q6ZUJ4 267 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
SLIRP-207ENST00000556831 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 DLG3Q92796 817 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 ZUFSPQ96AP4 578 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 TSPAN17Q96FV3 270 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 SLC45A3Q96JT2 553 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 CATSPER2Q96P56 530 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 PKP4Q99569 1192 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 NDC1Q9BTX1 674 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 ACAT2Q9BWD1 397 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 TSPYL1Q9H0U9 437 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 MRPS30Q9NP92 439 aaKnown RBP13.56□□□□□ -0.24
SLIRP-207ENST00000556831 MED16Q9Y2X0 877 aa13.56□□□□□ -0.24
SLIRP-207ENST00000556831 SNRNP200O75643 2136 aaKnown RBP13.55□□□□□ -0.24
SLIRP-207ENST00000556831 ENO4A6NNW6 628 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 TARM1B6A8C7 271 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 SLC16A5O15375 505 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 ZNF749O43361 778 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 SLC16A8O95907 504 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 ITGB2P05107 769 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 PRKAR1AP10644 381 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 FDXRP22570 491 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 PSMB5P28074 263 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 GABRB3P28472 473 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 PHBP35232 272 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 MAGEA4P43358 317 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 CBLBQ13191 982 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 DNASE1L3Q13609 305 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 GLE1Q53GS7 698 aaKnown RBP13.55□□□□□ -0.24
SLIRP-207ENST00000556831 TCTE1Q5JU00 501 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 C16orf46Q6P387 395 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 FIGLAQ6QHK4 219 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 SUSD1Q6UWL2 747 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 FRA10AC1Q70Z53 315 aa13.55□□□□□ -0.24
SLIRP-207ENST00000556831 ADCK2Q7Z695 626 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms