RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 ACTR1BP42025 376 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 CCR3P51677 355 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 ACTR1AP61163 376 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 YPEL5P62699 121 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 MXRA7P84157 204 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 EIF2B5Q13144 721 aaKnown RBP13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 CUL3Q13618 768 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 SQLEQ14534 574 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 RPE65Q16518 533 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 UAP1L1Q3KQV9 507 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 GJD3Q8N144 294 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 FNDC5Q8NAU1 212 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 CLPTM1LQ96KA5 538 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 ACPTQ9BZG2 426 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 AASDHPPTQ9NRN7 309 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 DMDP11532 3685 aa13.37□□□□□ -0.27
EFCAB11-212ENST00000556639 NDUFS2O75306 463 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 WNT1P04628 370 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 DDX39BQ13838 428 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 ATP6AP1LQ52LC2 224 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 THEMIS2Q5TEJ8 643 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 SLCO4C1Q6ZQN7 724 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 FAM20CQ8IXL6 584 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 MAGEC3Q8TD91 643 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 RCN3Q96D15 328 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 CAMK1GQ96NX5 476 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 MTERF1Q99551 399 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 NPAS2Q99743 824 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 ELOVL6Q9H5J4 265 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 SLC40A1Q9NP59 571 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 H0YHG0 523 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 SLC2A4P14672 509 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 JUPP14923 745 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 RABIFP47224 123 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 CXCL12P48061 93 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 RASSF2P50749 326 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 RPL6Q02878 288 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 FZD2Q14332 565 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 GGTA1PQ4G0N0 100 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 TRIM46Q7Z4K8 759 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 SLC29A3Q9BZD2 475 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 CCDC177Q9NQR7 707 aaPredicted RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 RIC8BQ9NVN3 520 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 KCNE2Q9Y6J6 123 aa13.36□□□□□ -0.27
EFCAB11-212ENST00000556639 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 A0A1W2PPV9 198 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 METTL12A8MUP2 240 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 TNFRSF10CO14798 259 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 KRT6AP02538 564 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 KRT6BP04259 564 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 ERGP11308 486 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 ITGAXP20702 1163 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 KRT6CP48668 564 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 UFM1P61960 85 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 RPL38P63173 70 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 C1orf61Q13536 156 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 SF1Q15637 639 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 IL23RQ5VWK5 629 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 OGFOD2Q6N063 350 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 OR52E1Q8NGJ3 308 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 MIR1-1HGQ9H1L0 117 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 AIG1Q9NVV5 245 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 TAC3Q9UHF0 121 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 PACSIN3Q9UKS6 424 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 DMTF1Q9Y222 760 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 POLR3HQ9Y535 204 aaPredicted RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 SPTY2D1-AS1A0A0U1RR47 76 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 KLHL33A6NCF5 533 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 FBP2O00757 339 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 VPS4BO75351 444 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 SORBS2O94875 1100 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 THRAP10827 490 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 G6PDP11413 515 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 GNAZP19086 355 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 RPS9P46781 194 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 ERVK-8P63133 956 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 KRT33BQ14525 404 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 PRAMEF14Q5SWL7 426 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 PRAMEF13Q5VWM6 474 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 LIPJQ5W064 366 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 FBXW10Q5XX13 1052 aa13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-212ENST00000556639 WDR20Q8TBZ3 569 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms