RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 IKZF3Q9UKT9 509 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ANGPTL3Q9Y5C1 460 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 KCNE2Q9Y6J6 123 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 IGHV5-10-1A0A0J9YXX1 117 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 A0A0J9YY10 115 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 NCF1BA6NI72 391 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 A8MU76 341 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 NCF1CA8MVU1 366 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 STX16-NPEPL1H3BU86 382 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 UBXN8O00124 270 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 DYNC1I1O14576 645 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 STX16O14662 325 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 MAP2K7O14733 419 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 HGSO14964 777 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 ATP8B1O43520 1251 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 CSO75390 466 aaKnown RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 WDR47O94967 919 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ZBTB11O95625 1053 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 ANKRD34CP0C6C1 535 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 THRAP10827 490 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 MYL2P10916 166 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 NCF1P14598 390 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 HOXB3P14651 431 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 UGT2B7P16662 529 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ATP5F1P24539 256 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 CSF2RBP32927 897 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 GGT5P36269 586 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 GMPRP36959 345 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 GFERP55789 205 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 NAA20P61599 178 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 TBPL1P62380 186 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 HSD11B2P80365 405 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PRDX1Q06830 199 aaKnown RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 ZFP36L1Q07352 338 aaKnown RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 GPS2Q13227 327 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PFKFB4Q16877 469 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PTCHD3Q3KNS1 767 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 AGBL2Q5U5Z8 902 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ICE2Q659A1 982 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SUSD1Q6UWL2 747 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 LCTLQ6UWM7 567 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 MBOAT1Q6ZNC8 495 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 FAM92BQ6ZTR7 304 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SH2D5Q6ZV89 423 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 LRRC70Q7Z2Q7 622 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 TAX1BP1Q86VP1 789 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 C17orf64Q86WR6 236 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 C2orf73Q8N5S3 287 aaPredicted RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 TBC1D19Q8N5T2 526 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 DCBLD1Q8N8Z6 715 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 BANPQ8N9N5 519 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 LMNTD1Q8N9Z9 388 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 LINC01555Q8NAE3 123 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 OR2L3Q8NG85 312 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 OR56A3Q8NH54 315 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PPP4R1Q8TF05 950 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ZUFSPQ96AP4 578 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 CCDC74BQ96LY2 380 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 OR2A14Q96R47 310 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 MAP3K3Q99759 626 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ACAT2Q9BWD1 397 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SGPP1Q9BX95 441 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PITPNM3Q9BZ71 974 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SEMA6CQ9H3T2 930 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 TMBIM4Q9HC24 238 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 MRPS30Q9NP92 439 aaKnown RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 ABCF3Q9NUQ8 709 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 DNAJC11Q9NVH1 559 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ZNF358Q9NW07 568 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SOHLH2Q9NX45 425 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SPHK1Q9NYA1 384 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 ANKMY1Q9P2S6 941 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 OPTCQ9UBM4 332 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 TAC3Q9UHF0 121 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 PTBP2Q9UKA9 531 aaKnown RBP7.37□□□□□ -1.23
TDP1-214ENST00000556063 SNX7Q9UNH6 387 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 KIF26BQ2KJY2 2108 aa7.37□□□□□ -1.23
TDP1-214ENST00000556063 SPTBP11277 2137 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CCDC187A0A096LP49 1063 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 SLC9B1P1A6NJY1 282 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 FOXO6A8MYZ6 492 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TARM1B6A8C7 271 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TK2O00142 265 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CLGNO14967 610 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 TM9SF1O15321 606 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 PRICKLE3O43900 615 aaPredicted RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 KLK8O60259 260 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CCNT2O60583 730 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 PLIN3O60664 434 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 H2AFYO75367 372 aaKnown RBP7.36□□□□□ -1.23
TDP1-214ENST00000556063 KATNA1O75449 491 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 ZWINTO95229 277 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 MTHFD2P13995 350 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CPA3P15088 417 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 GNAZP19086 355 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 CXCR2P25025 360 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 MPSTP25325 297 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 GRK3P35626 688 aa7.36□□□□□ -1.23
TDP1-214ENST00000556063 KCNC1P48547 511 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms