RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ACADLP28330 430 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 AKT1P31749 480 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 EFNA3P52797 238 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 WNT3AP56704 352 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 RAC1P63000 192 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 PMP22Q01453 160 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 TFF3Q07654 80 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 WASHC5Q12768 1159 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 HYAL2Q12891 473 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 MSLNQ13421 630 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 SLC1A5Q15758 541 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 MICALCLQ6ZW33 695 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 WFDC8Q8IUA0 241 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 TGIF2LYQ8IUE0 185 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 SIAH3Q8IW03 269 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 ANKRD20A12PQ8NF67 263 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 BRIX1Q8TDN6 353 aaKnown RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 PHF10Q8WUB8 498 aaKnown RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 TEKT5Q96M29 485 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 DMRTA2Q96SC8 542 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-218ENST00000555628 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 TXLNGQ9NUQ3 528 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 HACD3Q9P035 362 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
PRKCH-218ENST00000555628 A0A0A6YYK5 440 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 USP1O94782 785 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 RASAL1O95294 804 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 NADKO95544 446 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 WDPCPO95876 746 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 CRYABP02511 175 aaKnown RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 SERPINA7P05543 415 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 CELA2AP08217 269 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 ACPPP15309 386 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 FDXRP22570 491 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 MCM3P25205 808 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 SMSP52788 366 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 ARG2P78540 354 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 KLC1Q07866 573 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 PRKG2Q13237 762 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 RBBP7Q16576 425 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 TEX44Q53QW1 395 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 NPNTQ6UXI9 565 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 MEX3BQ6ZN04 569 aaKnown RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 TTLL10Q6ZVT0 673 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 GLT6D1Q7Z4J2 308 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 FGD2Q7Z6J4 655 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 OR5AR1Q8NGP9 310 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 ZNF398Q8TD17 642 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 CHTF18Q8WVB6 975 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 DLG3Q92796 817 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 C8orf44Q96CB5 159 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 FERD3LQ96RJ6 166 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 FOXC2Q99958 501 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 GSX1Q9H4S2 264 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-218ENST00000555628 OR6C2Q9NZP2 312 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 FAM153AQ9UHL3 310 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 ARL5AQ9Y689 179 aa8.67□□□□□ -1.02
PRKCH-218ENST00000555628 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 ASPDHA6ND91 283 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 TMEM200CA6NKL6 621 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 FANCGO15287 622 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 PRAMEF2O60811 474 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 PROSCO94903 275 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 BMP10O95393 424 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 F10P00742 488 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 TPM2P07951 284 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 SKILP12757 684 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 MAGP20916 626 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 CDK11BP21127 795 aaKnown RBP8.66□□□□□ -1.02
PRKCH-218ENST00000555628 KDELR1P24390 212 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 SHMT2P34897 504 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 SERPINB4P48594 390 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 IST1P53990 364 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 ARSFP54793 590 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 FANCCQ00597 558 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 AP1B1Q10567 949 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 RPA4Q13156 261 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 KRT33BQ14525 404 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 PDK1Q15118 436 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 HADHQ16836 314 aaKnown RBP8.66□□□□□ -1.02
PRKCH-218ENST00000555628 FAAH2Q6GMR7 532 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 HIBCHQ6NVY1 386 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-218ENST00000555628 VSIG1Q86XK7 387 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 SPPL2CQ8IUH8 684 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 KBTBD2Q8IY47 623 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 SIRT6Q8N6T7 355 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 LINC01555Q8NAE3 123 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 KCTD6Q8NC69 237 aa8.66□□□□□ -1.02
PRKCH-218ENST00000555628 BLOC1S5Q8TDH9 187 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms