RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 FBXO25Q8TCJ0 367 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 MR1Q95460 341 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CLIP3Q96DZ5 547 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 MCMBPQ9BTE3 642 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 RAB11FIP5Q9BXF6 653 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 ACTR5Q9H9F9 607 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 FANCEQ9HB96 536 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 TAS2R13Q9NYV9 303 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 DHCR7Q9UBM7 475 aaKnown RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 IKZF3Q9UKT9 509 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 E7ENX8 843 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 E7EQ34 232 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 OR2B3O76000 313 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 MED26O95402 600 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 SYF2O95926 243 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 MT-ND3P03897 115 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 GCGRP47871 477 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 FOXL2P58012 376 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 TAP2Q03519 686 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 ERV3-1Q14264 604 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 ZNF460Q14592 562 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 PHKG1Q16816 387 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 ZXDCQ2QGD7 858 aaPredicted RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 UBAP2Q5T6F2 1119 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 C1orf189Q5VU69 101 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 FAM198BQ6UWH4 519 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 STRA8Q7Z7C7 330 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 ZC3HC1Q86WB0 502 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 SYTL1Q8IYJ3 562 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 DTWD1Q8N5C7 304 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 NOA1Q8NC60 698 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 SLC22A18Q96BI1 424 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 LINGO1Q96FE5 620 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 WBP1Q96G27 269 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 LRFN5Q96NI6 719 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 FAM114A2Q9NRY5 505 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 PLCL2Q9UPR0 1127 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 PDE10AQ9Y233 779 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 VWA7Q9Y334 891 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 UTP11Q9Y3A2 253 aaKnown RBP13.13□□□□□ -0.31
SNX6-203ENST00000555416 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
SNX6-203ENST00000555416 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 LOC102723532A0A0G2JNH3 316 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 MAP3K7O43318 606 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 CREG1O75629 220 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 ITGB2P05107 769 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 ITGAXP20702 1163 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 IMPA1P29218 277 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 TSTA3Q13630 321 aaPredicted RBP13.12□□□□□ -0.31
SNX6-203ENST00000555416 IL10RAQ13651 578 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 DEFB109BQ30KR1 87 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 FRMPD2BQ6IN97 320 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 SMPDL3AQ92484 453 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
SNX6-203ENST00000555416 DPH7Q9BTV6 452 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 ZDHHC18Q9NUE0 388 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 ABCF3Q9NUQ8 709 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 ZFATQ9P243 1243 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 TAC3Q9UHF0 121 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 KLK4Q9Y5K2 254 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 PCSK5Q92824 1860 aa13.12□□□□□ -0.31
SNX6-203ENST00000555416 TCRBV9S1A1TA0A576 114 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 OR2A25A4D2G3 310 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 C21orf140B9A014 251 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 EIF3HO15372 352 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX6-203ENST00000555416 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 ZBTB14O43829 449 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 CNOT3O75175 753 aaKnown RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 SAT1P21673 171 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 PTPN4P29074 926 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 TAS2R39P59534 338 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 FAM45BPQ6NSW5 357 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 UGT3A1Q6NUS8 523 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 CCDC25Q86WR0 208 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 CEP97Q8IW35 865 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 GPR135Q8IZ08 494 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 ZNF843Q8N446 348 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 ENDOVQ8N8Q3 282 aaKnown RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 LSM14AQ8ND56 463 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms