RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 HOXB1P14653 301 aaPredicted RBP15.27■□□□□ 0.03
SYNE3-203ENST00000554873 FOSL1P15407 271 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 GRK5P34947 590 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 KRT20P35900 424 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 CDKN2DP55273 166 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 GRIK2Q13002 908 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 RIN1Q13671 783 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 ARTNQ5T4W7 220 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 GPR158Q5T848 1215 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 ISCA2Q86U28 154 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 MARC2Q969Z3 335 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 REPS1Q96D71 796 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 L3HYPDHQ96EM0 354 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 RNF31Q96EP0 1072 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 RIBC2Q9H4K1 309 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 GORASP2Q9H8Y8 452 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 MUTYHQ9UIF7 546 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 PCDHB5Q9Y5E4 795 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 PTCH2Q9Y6C5 1203 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF236Q9UL36 1845 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 A0A075B6Q4 140 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 PPP6CO00743 305 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 TREHO43280 583 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 RECQL5O94762 991 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 ZFP36L2P47974 494 aaKnown RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 DIO3P55073 304 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 SH3BP2P78314 561 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF33BQ06732 778 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 ASAH1Q13510 395 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 MAD2L1BPQ15013 274 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 BAK1Q16611 211 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 SOWAHCQ53LP3 525 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 ANKS3Q6ZW76 656 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 GALNT5Q7Z7M9 940 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 SMARCD1Q96GM5 515 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 TEX37Q96LM6 180 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 FERD3LQ96RJ6 166 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 SPATA9Q9BWV2 254 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 IFT22Q9H7X7 185 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 C3orf14Q9HBI5 128 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 FARSBQ9NSD9 589 aaKnown RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 POLG2Q9UHN1 485 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 PKP3Q9Y446 797 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 PAGE1O75459 146 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 CYP7B1O75881 506 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 PFKLP17858 780 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 GJA5P36382 358 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 MRPL19P49406 292 aaKnown RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 LIMK1P53667 647 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 SCN1BQ07699 218 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 RGS1Q08116 209 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 IKZF1Q13422 519 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 PON2Q15165 354 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 TBCEQ15813 527 aaPredicted RBP15.26■□□□□ 0.03
SYNE3-203ENST00000554873 C3orf58Q8NDZ4 430 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 TSPAN17Q96FV3 270 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 KCNS3Q9BQ31 491 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 OR51E2Q9H255 320 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 LIMD1Q9UGP4 676 aa15.26■□□□□ 0.03
SYNE3-203ENST00000554873 A0A1W2PQ09 198 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CCL22O00626 93 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 AZIN1O14977 448 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ANKRD28O15084 1053 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 HOXD4P09016 255 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 EIF4EBP2Q13542 120 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 KDELC1Q6UW63 502 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF782Q6ZMW2 699 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 SPATA19Q7Z5L4 167 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 DPP9Q86TI2 863 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 TMEM86AQ8N2M4 240 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CCDC115Q96NT0 180 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CSNK1G1Q9HCP0 422 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ING3Q9NXR8 418 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF224Q9NZL3 707 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 VPS4BO75351 444 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 PAPSS2O95340 614 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 WISP3O95389 354 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CYP4B1P13584 511 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 POLR2JP52435 117 aaKnown RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 TYW3Q6IPR3 259 aaKnown RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 KIAA1324Q6UXG2 1013 aaKnown RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 LRRC8DQ7L1W4 858 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF467Q7Z7K2 595 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 PIM3Q86V86 326 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CILP2Q8IUL8 1156 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CYP4Z2PQ8N1L4 340 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 OR7D4Q8NG98 312 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 MYLPFQ96A32 169 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 PTERQ96BW5 349 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 FCRL2Q96LA5 508 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 UTS2RQ9UKP6 389 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 BTN3A3O00478 584 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ERN1O75460 977 aaKnown RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 SLC22A3O75751 556 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 IGLV3-25P01717 112 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 HMGCLP35914 325 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CPT1AP50416 773 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 TAB1Q15750 504 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 LEXMQ3ZCV2 418 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms