RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 FAM199XQ6PEV8 388 aaPredicted RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 PIWIL4Q7Z3Z4 852 aaKnown RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 ZC3HC1Q86WB0 502 aaKnown RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 MCATQ8IVS2 390 aaKnown RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 SYTL1Q8IYJ3 562 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 SLC38A9Q8NBW4 561 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 OR2L3Q8NG85 312 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 CT55Q8WUE5 264 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 STARD8Q92502 1023 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 MIPEPQ99797 713 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 DPH2Q9BQC3 489 aaPredicted RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 ARHGAP9Q9BRR9 750 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 SPRTNQ9H040 489 aaPredicted RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 PARVBQ9HBI1 364 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 IRAK4Q9NWZ3 460 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
APEX1-208ENST00000554813 EURLQ9NYK6 297 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
APEX1-208ENST00000554813 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 IGSF10Q6WRI0 2623 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 A0A1W2PPV9 198 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 PABPN1LA6NDY0 278 aaKnown RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 ZSCAN9O15535 394 aaPredicted RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 HCRTR1O43613 425 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 RECKO95980 971 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 HIST1H2AGP0C0S8 130 aaPredicted RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 HIST1H2ADP20671 130 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 SAT1P21673 171 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 FDXRP22570 491 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 F8A1P23610 371 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 PSMB5P28074 263 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 RORAP35398 523 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 MAGEA4P43358 317 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 SP140Q13342 867 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 TRADDQ15628 312 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 TBR1Q16650 682 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 FCRL6Q6DN72 434 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 ZNF480Q8WV37 535 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 SEC14L1Q92503 715 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 LINGO1Q96FE5 620 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 VPS39Q96JC1 886 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 HIST1H2AHQ96KK5 128 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 HIST1H2AJQ99878 128 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 H2AFJQ9BTM1 129 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 ACAT2Q9BWD1 397 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 AKIRIN1Q9H9L7 192 aaPredicted RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 SRPK3Q9UPE1 567 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
APEX1-208ENST00000554813 KLK4Q9Y5K2 254 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 PSAT1Q9Y617 370 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
APEX1-208ENST00000554813 TCRBV9S1A1TA0A576 114 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 E7ENX8 843 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 SRPX2O60687 465 aaPredicted RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 CREG1O75629 220 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 PRKAR1AP10644 381 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 PTPN4P29074 926 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 ARSFP54793 590 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 SLC12A2P55011 1212 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 TAP2Q03519 686 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 CDC20Q12834 499 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 TCTE1Q5JU00 501 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 RHBDD2Q6NTF9 364 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 BORAQ6PGQ7 559 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 ZDHHC24Q6UX98 284 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 NKAPQ8N5F7 415 aaKnown RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 ZNF655Q8N720 491 aaPredicted RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 DLG3Q92796 817 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 EXTL1Q92935 676 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 BBC3Q96PG8 261 aaPredicted RBP12.71□□□□□ -0.37
APEX1-208ENST00000554813 OLFM1Q99784 485 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 C17orf62Q9BQA9 187 aa12.71□□□□□ -0.37
APEX1-208ENST00000554813 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms