RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PDX1P52945 283 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 DVL1P1P54792 670 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 NAGLUP54802 743 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RASGEF1BQ0VAM2 473 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 TAF10Q12962 218 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 TNK1Q13470 666 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RCN2Q14257 317 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 ITPRIPL2Q3MIP1 535 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 DCAF10Q5QP82 559 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 CCNYL2Q5T2Q4 361 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 PDSS1Q5T2R2 415 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 C11orf63Q6NUN7 778 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 CYB5D1Q6P9G0 228 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 SLC27A1Q6PCB7 646 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RTN4RL2Q86UN3 420 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 DZIP1Q86YF9 867 aaKnown RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 TUSC5Q8IXB3 177 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 GPALPP1Q8IXQ4 340 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 MMD2Q8IY49 270 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 LGI2Q8N0V4 545 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 EID3Q8N140 333 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 METTL27Q8N6F8 245 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 GPATCH11Q8N954 259 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 DMBX1Q8NFW5 382 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 KBTBD8Q8NFY9 601 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 OR1J1Q8NGS3 322 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 FIBINQ8TAL6 211 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 GRHL3Q8TE85 626 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 GRK7Q8WTQ7 553 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 CCDC107Q8WV48 283 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RAD54LQ92698 747 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 DHX58Q96C10 678 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 SCRN2Q96FV2 425 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 FAM71F1Q96KD3 344 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 PGLYRP2Q96PD5 576 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 FUT8Q9BYC5 575 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 UPF2Q9HAU5 1272 aaKnown RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF334Q9HCZ1 680 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 ERAP1Q9NZ08 941 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 TXNDC16Q9P2K2 825 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 NME7Q9Y5B8 376 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 SNX5Q9Y5X3 404 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 IGSF1Q8N6C5 1336 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 A0A1W2PPI3 338 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 SMIM30A4D0T7 59 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PRR23AA6NEV1 266 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TRIM64A6NGJ6 449 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 C5orf52A6NGY3 159 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 CASTOR2A6NHX0 329 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TRIM64BA6NI03 449 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DUXAA6NLW8 204 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PRR32B1ATL7 298 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PLOD2O00469 737 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PRKNO60260 465 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 FCGR3BO75015 233 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 SLC22A3O75751 556 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ATP6AP2O75787 350 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DDHD2O94830 711 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 NR3C1P04150 777 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 HMOX1P09601 288 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD34CP0C6C1 535 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 STAG3L1P0CL83 205 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PAX1P15863 534 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 CASTP20810 708 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PSMA3P25788 255 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ALDH1B1P30837 517 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TIMP3P35625 211 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 KRT2P35908 639 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TCF7P36402 384 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DCTP40126 519 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 GLIPR1P48060 266 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 PHEXP78562 749 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DLK1P80370 383 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 RBM39Q14498 530 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 KIR2DS3Q14952 304 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 UGCGQ16739 394 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 MEP1BQ16820 701 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD20A4Q4UJ75 823 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD20A8PQ5CZ79 823 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 XKR3Q5GH77 459 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD20A2Q5SQ80 823 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD20A1Q5TYW2 823 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ANKRD20A3Q5VUR7 823 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 LINGO4Q6UY18 593 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 MSANTD1Q6ZTZ1 278 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 TRMT1LQ7Z2T5 733 aaKnown RBP2.86□□□□□ -1.95
SCFD1-213ENST00000554776 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF554Q86TJ5 538 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 NAT8LQ8N9F0 302 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 ATAD1Q8NBU5 361 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 MSANTD4Q8NCY6 345 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 KLHDC9Q8NEP7 349 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DBF4BQ8NFT6 615 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 OR2T12Q8NG77 320 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 OR4K1Q8NGD4 311 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 MGARPQ8TDB4 240 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 KRT35Q92764 455 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 DNASE1L2Q92874 299 aa2.86□□□□□ -1.95
SCFD1-213ENST00000554776 RIT1Q92963 219 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms