RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ACSS3Q9H6R3 686 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 MVB12BQ9H7P6 319 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 FANCEQ9HB96 536 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 SPHK1Q9NYA1 384 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 BFARQ9NZS9 450 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 LGALS13Q9UHV8 139 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 MDC1Q14676 2089 aaKnown RBP10.21□□□□□ -0.78
SHMT2-215ENST00000554656 NOTCH2Q04721 2471 aa10.21□□□□□ -0.78
SHMT2-215ENST00000554656 DOPEY1Q5JWR5 2465 aa10.21□□□□□ -0.78
SHMT2-215ENST00000554656 A6NL46 340 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 C2orf74A8MZ97 194 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 MASP2O00187 686 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 IFRD1O00458 451 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 KLF7O75840 302 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CBSLP0DN79 551 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 UGT2B7P16662 529 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 PEBP1P30086 187 aaKnown RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 FOXN2P32314 431 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 STX2P32856 288 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CBSP35520 551 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CACNG1Q06432 222 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CDH17Q12864 832 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 RAPSNQ13702 412 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 POU6F1Q14863 301 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 FASTKD3Q14CZ7 662 aaKnown RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 TNFAIP8L3Q5GJ75 292 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 SLC6A19Q695T7 634 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 JMJD6Q6NYC1 403 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 UNC5AQ6ZN44 842 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 TAS2R42Q7RTR8 314 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 MRGPREQ86SM8 312 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 TAB3Q8N5C8 712 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 C19orf47Q8N9M1 422 aaKnown RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 HEXDCQ8WVB3 486 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 TLCD1Q96CP7 247 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CDKN2AIPNLQ96HQ2 116 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 OR2A14Q96R47 310 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CYTH2Q99418 400 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 SMAD5Q99717 465 aaKnown RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 IL22Q9GZX6 179 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 VPS37BQ9H9H4 285 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 SYTL2Q9HCH5 934 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 ZC3H7BQ9UGR2 993 aaKnown RBP10.2□□□□□ -0.78
SHMT2-215ENST00000554656 CHMP2BQ9UQN3 213 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 ZNF451Q9Y4E5 1061 aa10.2□□□□□ -0.78
SHMT2-215ENST00000554656 ITPR2Q14571 2701 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 EXOC1LA0A1B0GW35 172 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SLC5A10A0PJK1 596 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 CCDC162PA2VCL2 907 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 MROH6A6NGR9 719 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 E7EQ34 232 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 RGS16O15492 202 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 VPS4BO75351 444 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SHBGP04278 402 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 CHRM5P08912 532 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 PGAM1P18669 254 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 GPX6P59796 221 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 MRPL49Q13405 166 aaKnown RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 NAB1Q13506 487 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 INPP5JQ15735 1006 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 TUBB8Q3ZCM7 444 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 TTMPQ5BVD1 217 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 C1orf189Q5VU69 101 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 PACS1Q6VY07 963 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 LURAP1LQ8IV03 231 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 ANKMY2Q8IV38 441 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 FAM20CQ8IXL6 584 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 ARFGAP2Q8N6H7 521 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 LMNTD1Q8N9Z9 388 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 OR2W6PQ8NHA6 318 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 STYXQ8WUJ0 223 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 ARL8AQ96BM9 186 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 GBP5Q96PP8 586 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 WDR83Q9BRX9 315 aaKnown RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SPRTNQ9H040 489 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 MRM3Q9HC36 420 aaKnown RBP10.19□□□□□ -0.78
SHMT2-215ENST00000554656 EURLQ9NYK6 297 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SAMD15Q9P1V8 674 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SLC2A6Q9UGQ3 507 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 SERTAD3Q9UJW9 196 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 PLAGL1Q9UM63 463 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 VPS4AQ9UN37 437 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 CDYLQ9Y232 598 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 PCDHGB7Q9Y5F8 929 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 ACTL7BQ9Y614 415 aa10.19□□□□□ -0.78
SHMT2-215ENST00000554656 CENPEQ02224 2701 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 TCP11X1B4DZS4 312 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 C9J4A7 227 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 LIN7AO14910 233 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 OR1I1O60431 355 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 AP2A2O94973 939 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 AGFG2O95081 481 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 GSTM1P09488 218 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 ITGAXP20702 1163 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 OTX2P32243 289 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 SHMT2P34897 504 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 GCGRP47871 477 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms