RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 VASNQ6EMK4 673 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PAQR3Q6TCH7 311 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 THAP5Q7Z6K1 395 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PIM3Q86V86 326 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 BBS7Q8IWZ6 715 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ETFBKMTQ8IXQ9 262 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PEX5LQ8IYB4 626 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PCSK9Q8NBP7 692 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ABHD11Q8NFV4 315 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 WDR36Q8NI36 951 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SFXN5Q8TD22 340 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ATL1Q8WXF7 558 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 WBP2Q969T9 261 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CHFRQ96EP1 664 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 LCORQ96JN0 433 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SLC6A18Q96N87 628 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 LRFN5Q96NI6 719 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GCNAQ96QF7 691 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGDIGQ99819 225 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FOLH1BQ9HBA9 442 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CCNB1IP1Q9NPC3 277 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ACOT13Q9NPJ3 140 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 RYDENQ9NUL5 291 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 TRMT13Q9NUP7 481 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GMPR2Q9P2T1 348 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 IL20RAQ9UHF4 553 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 DNMT3LQ9UJW3 386 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 LIPT1Q9Y234 373 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHGA8Q9Y5G5 932 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ARL5AQ9Y689 179 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PRSS21Q9Y6M0 314 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 V9GYH0 126 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FUOMA2VDF0 154 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 KDM4EB2RXH2 506 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SCAMP2O15127 329 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PHGDHO43175 533 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ASNA1O43681 348 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SCO2O43819 266 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 DFNA5O60443 496 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ADAM23O75077 832 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SEMA7AO75326 666 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ALDH1A1P00352 501 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CDK1P06493 297 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 THRBP10828 461 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 HSPA8P11142 646 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SDC1P18827 310 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FPR1P21462 350 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 IDSP22304 550 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 EEF1DP29692 281 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 BMPR1AP36894 532 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ACVRL1P37023 503 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CD96P40200 585 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CD86P42081 329 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SLC11A1P49279 550 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SESN2P58004 480 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 RAD51Q06609 339 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SRSF4Q08170 494 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SLC14A1Q13336 389 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GPR50Q13585 617 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GTF2H2Q13888 395 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGAP19Q14CB8 494 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PTPRRQ15256 657 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 DUOXA1Q1HG43 343 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 TTC23Q5W5X9 447 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ANKS6Q68DC2 871 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CES5AQ6NT32 575 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GTF2H2CQ6P1K8 395 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PNCKQ6P2M8 343 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 DLK2Q6UY11 383 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 RALGPS2Q86X27 583 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 METTL23Q86XA0 190 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 NXPE1Q8N323 547 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 RNF148Q8N7C7 305 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PTGR2Q8N8N7 351 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SETD7Q8WTS6 366 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 LIPHQ8WWY8 451 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 RSC1A1Q92681 617 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PDXPQ96GD0 296 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CRELD1Q96HD1 420 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 MPP4Q96JB8 637 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 COX4I2Q96KJ9 171 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GAD1Q99259 594 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SH3GL1Q99961 368 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF426Q9BUY5 554 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CCDC32Q9BV29 185 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ALOXE3Q9BYJ1 711 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CEP41Q9BYV8 373 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 WDR12Q9GZL7 423 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 AICDAQ9GZX7 198 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 HPS4Q9NQG7 708 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 INTS7Q9NVH2 962 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 UXTQ9UBK9 157 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 OPTCQ9UBM4 332 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CES1P1Q9UKY3 287 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ICAM5Q9UMF0 924 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHB11Q9Y5F2 797 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CORINQ9Y5Q5 1042 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FANCMQ8IYD8 2048 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms