RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 A0A087WV62 115 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PIPSLA2A3N6 862 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 MARCH11A6NNE9 402 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 CLCA1A8K7I4 914 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 TCP11X1B4DZS4 312 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 POLR1CO15160 346 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PPM1DO15297 605 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 HNRNPRO43390 633 aaKnown RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 BUB1O43683 1085 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 KDELR3O43731 214 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 DAB1O75553 588 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 NCR1O76036 304 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 STK17BO94768 372 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ZFPL1O95159 310 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 GPANK1O95872 356 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 IGSF6O95976 241 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 LDLRP01130 860 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PCCBP05166 539 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PFKFB1P16118 471 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 BTF3P20290 206 aaKnown RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 F8A1P23610 371 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 DLSTP36957 453 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 SYKP43405 635 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 LEPRP48357 1165 aaKnown RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PMS2P54278 862 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 TRIM14Q14142 442 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 SLC25A52Q3SY17 297 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 NADK2Q4G0N4 442 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PLA1AQ53H76 456 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ATP1A1-AS1Q5TC04 95 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 B3GNTL1Q67FW5 361 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ANKRD40Q6AI12 368 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 SLC26A9Q7LBE3 791 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 NRROSQ86YC3 692 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 MYLK4Q86YV6 388 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ZDHHC17Q8IUH5 632 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 SYTL1Q8IYJ3 562 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 OR10G6Q8NH81 332 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 PROKR1Q8TCW9 393 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 NT5C3BQ969T7 300 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF566Q969W8 418 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 C5orf34Q96MH7 638 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 MOGAT1Q96PD6 335 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 CTRCQ99895 268 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 MAGEH1Q9H213 219 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 AKIP1Q9NQ31 210 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 TAAR2Q9P1P5 351 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ERRFI1Q9UJM3 462 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 HPSEQ9Y251 543 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
ATXN3-228ENST00000554592 RP1P56715 2156 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 KIF26BQ2KJY2 2108 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 COL27A1Q8IZC6 1860 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 FAM237AA0A1B0GTK4 181 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TSPAN11A1L157 253 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 A8MU76 341 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RAB27BO00194 218 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RNASET2O00584 256 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RAMP2O60895 175 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 LRCH4O75427 683 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ERN1O75460 977 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 CREG1O75629 220 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RECQL5O94762 991 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SORBS2O94875 1100 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 TMCC1O94876 653 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ERBB2P04626 1255 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 IL1R2P27930 398 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PRCPP42785 496 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PPM1FP49593 454 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SULT1E1P49888 294 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ANXA11P50995 505 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PGDP52209 483 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 RHOAP61586 193 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 CFAP58Q5T655 872 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PAPD7Q5XG87 772 aaKnown RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 FCRL6Q6DN72 434 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 PNCKQ6P2M8 343 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 BRAT1Q6PJG6 821 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 SLC30A9Q6PML9 568 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 WDR74Q6RFH5 385 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-228ENST00000554592 OLFML1Q6UWY5 402 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 KRBA2Q6ZNG9 492 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 ENOSF1Q7L5Y1 443 aa4.79□□□□□ -1.64
ATXN3-228ENST00000554592 HPS6Q86YV9 775 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms