RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	BFAR	Q9NZS9	450 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MPP6	Q9NZW5	540 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	DKK2	Q9UBU2	259 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	GGA2	Q9UJY4	613 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SLC12A4	Q9UP95	1085 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	AAR2	Q9Y312	384 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MYO9B	Q13459	2157 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574		A0A1W2PPM1	405 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MAGEB16	A2A368	324 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	EBAG9	O00559	213 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TM9SF1	O15321	606 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PMPCB	O75439	489 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PIAS1	O75925	651 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ZWINT	O95229	277 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PEX11B	O96011	259 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SNRPA	P09012	282 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	HSPA8	P11142	646 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	DRD4	P21917	467 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CA4	P22748	312 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ACRV1	P26436	265 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	GK	P32189	559 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	NPY2R	P49146	381 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	HARS2	P49590	506 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SERPINB9	P50453	376 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	HNRNPH2	P55795	449 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	FOXL2	P58012	376 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	YBEY	P58557	167 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TAS2R50	P59544	299 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CDH17	Q12864	832 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ERV3-1	Q14264	604 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CRYM	Q14894	314 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	VEPH1	Q14D04	833 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PARP15	Q460N3	678 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SPANXN3	Q5MJ09	141 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	HECTD3	Q5T447	861 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	FBXL22	Q6P050	247 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CASC4	Q6P4E1	433 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SH2D5	Q6ZV89	423 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MARK2	Q7KZI7	788 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CPLX4	Q7Z7G2	160 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TMEM135	Q86UB9	458 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TMPRSS6	Q8IU80	811 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	KRTAP19-1	Q8IUB9	90 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CTAGE3P	Q8IX95	158 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TOR1AIP2	Q8NFQ8	470 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	OR52K1	Q8NGK4	314 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	DENND1A	Q8TEH3	1009 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	DYDC1	Q8WWB3	177 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CKAP2	Q8WWK9	683 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CDKL2	Q92772	493 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	AZIN2	Q96A70	460 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ERP27	Q96DN0	273 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MTBP	Q96DY7	904 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PTCD3	Q96EY7	689 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TRMT61A	Q96FX7	289 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	APOPT1	Q96IL0	206 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MAGEB18	Q96M61	343 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	YME1L1	Q96TA2	773 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	IL22	Q9GZX6	179 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	STN1	Q9H668	368 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	KIF9	Q9HAQ2	790 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CYP4F11	Q9HBI6	524 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MRPL17	Q9NRX2	175 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	SYBU	Q9NX95	663 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	UXT	Q9UBK9	157 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	IPO11	Q9UI26	975 aa	Known RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	YIPF1	Q9Y548	306 aa		4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.68	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PIKFYVE	Q9Y2I7	2098 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ATXN2	Q99700	1313 aa	Known RBP	4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3D	A0A087WVF3	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3I	A0A087WXS9	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3E	A0A087X179	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3K	A0A087X1G2	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	FAM237B	A0A1B0GVD1	139 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3B	A6NDS4	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3L	B9A6J9	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574		F5H5T6	163 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	PRRG1	O14668	218 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	COCH	O43405	550 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ACSL4	O60488	711 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	CNTN5	O94779	1100 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	GJB5	O95377	273 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	OAS1	P00973	400 aa	Known RBP	4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	MT-ND3	P03897	115 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	HLA-DQB2	P05538	268 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	LINC00271	P0C7V0	271 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TBC1D3H	P0C7X1	549 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TACR2	P21452	398 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	TGM1	P22735	817 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	ITPKB	P27987	946 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	OR1E1	P30953	314 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	GRK5	P34947	590 aa		4.67	□□□□□ -1.66
PPP4R3A-204	ENST00000554574	RPA3	P35244	121 aa	Predicted RBP	4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms