RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 XKR3Q5GH77 459 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 WDR38Q5JTN6 314 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 SLC10A5Q5PT55 438 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD20A2Q5SQ80 823 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD20A1Q5TYW2 823 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD20A3Q5VUR7 823 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 NHLRC1Q6VVB1 395 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 C15orf39Q6ZRI6 1047 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 CCDC170Q8IYT3 715 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 APCDD1Q8J025 514 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 UXS1Q8NBZ7 420 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 OR52N5Q8NH56 324 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 FCAMRQ8WWV6 532 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF354BQ96LW1 612 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 RHNO1Q9BSD3 238 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 PRRG4Q9BZD6 226 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 RSPH9Q9H1X1 276 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 TLE6Q9H808 572 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 MINDY3Q9H8M7 445 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 GSN-AS1Q9NRJ2 163 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 KCNG2Q9UJ96 466 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ITGA11Q9UKX5 1188 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 STUB1Q9UNE7 303 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 LIPT1Q9Y234 373 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 RIPK3Q9Y572 518 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 KIAA1210Q9ULL0 1709 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 SCN5AQ14524 2016 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 A0A1W2PPW3 197 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 OOEPA6NGQ2 149 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 PPIP5K2O43314 1243 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 PRKRAO75569 313 aaKnown RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 CRYAAP02489 173 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ATP1A1P05023 1023 aaKnown RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 IGHV4-31P0DP07 118 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 VAMP7P51809 220 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 RASGEF1BQ0VAM2 473 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF674Q2M3X9 581 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF718Q3SXZ3 478 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ACCSLQ4AC99 568 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ZC2HC1CQ53FD0 456 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 FAM76BQ5HYJ3 339 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 CYB5D1Q6P9G0 228 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 GBP6Q6ZN66 633 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 LINC00696Q6ZRV3 163 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD33Q7Z3H0 272 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 HOOK3Q86VS8 718 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 SNX32Q86XE0 403 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 DZIP1Q86YF9 867 aaKnown RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 KLHL7Q8IXQ5 586 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 LGI2Q8N0V4 545 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 RYBPQ8N488 228 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF383Q8NA42 475 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 DBF4BQ8NFT6 615 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 GRK7Q8WTQ7 553 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 RIT1Q92963 219 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 PTP4A1Q93096 173 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 SENP5Q96HI0 755 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 PARK7Q99497 189 aaKnown RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 CCDC3Q9BQI4 270 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 FUT8Q9BYC5 575 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 MIS12Q9H081 205 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 FGF21Q9NSA1 209 aa4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ARMCX3Q9UH62 379 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD61A6NGH8 418 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 YDJCA8MPS7 323 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 ATP6V0E1O15342 81 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 SNX3O60493 162 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 FMO6PO60774 539 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 RPS6KA5O75582 802 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 KRT36O76013 467 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 LUC7L3O95232 432 aaKnown RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 PLGP00747 810 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 RLN1P04808 185 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 VDRP11473 427 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 CDH3P22223 829 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 OAS2P29728 719 aaKnown RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 MAZP56270 477 aaKnown RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 POU3F1Q03052 451 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 ILF2Q12905 390 aaKnown RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 PHKG1Q16816 387 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 KIAA1161Q6NSJ0 714 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 C19orf48Q6RUI8 117 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 BTNL8Q6UX41 500 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 GDPD4Q6W3E5 623 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 ISCA2Q86U28 154 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 CDK20Q8IZL9 346 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 SYCP3Q8IZU3 236 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 EID3Q8N140 333 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 NUP93Q8N1F7 819 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF713Q8N859 430 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 LMNTD1Q8N9Z9 388 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 P2RX5Q93086 422 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 BSCL2Q96G97 398 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 URM1Q9BTM9 101 aaKnown RBP4.71□□□□□ -1.66
SYNE2-210ENST00000553455 DNAI2Q9GZS0 605 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 TRPV4Q9HBA0 871 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 TUFT1Q9NNX1 390 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 SEPT10Q9P0V9 454 aa4.71□□□□□ -1.66
SYNE2-210ENST00000553455 C2orf81A6NN90 581 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms