RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SELENOMQ8WWX9 145 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 RLN3Q8WXF3 142 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 TSACCQ96A04 125 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 MCUR1Q96AQ8 359 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 WDR34Q96EX3 536 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 CAMK1GQ96NX5 476 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 FRG2BQ96QU4 278 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 FERD3LQ96RJ6 166 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 ORAI3Q9BRQ5 295 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 RAB11FIP5Q9BXF6 653 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 EHD1Q9H4M9 534 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 WASH6PQ9NQA3 447 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 FARSBQ9NSD9 589 aaKnown RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 TMEM45AQ9NWC5 275 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 ASIC5Q9NY37 505 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PLAGL1Q9UM63 463 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 GPR45Q9Y5Y3 372 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 DGKBQ9Y6T7 804 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 LRP4O75096 1905 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 NPIPB8E9PQR5 432 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 H0YIV9 168 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 RSL1D1O76021 490 aaKnown RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 TNFP01375 233 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SNRPB2P08579 225 aaKnown RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 C1GALT1C1LP0DN25 315 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 MTHFD1P11586 935 aaKnown RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 CD1EP15812 388 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ITGAXP20702 1163 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PRPH2P23942 346 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PKLRP30613 574 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 DIO3P55073 304 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ELF3P78545 371 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 MTAPQ13126 283 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 STX5Q13190 355 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 TSTA3Q13630 321 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 RPS6KA2Q15349 733 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 RPE65Q16518 533 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 AP5B1Q2VPB7 878 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ATG9BQ674R7 924 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PAOXQ6QHF9 649 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SLCO4C1Q6ZQN7 724 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 RD3Q7Z3Z2 195 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ZFAND4Q86XD8 727 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 FAM160A2Q8N612 972 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 WDR20Q8TBZ3 569 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SLC5A11Q8WWX8 675 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SMPDL3AQ92484 453 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SNX19Q92543 992 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 NEIL2Q969S2 332 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 REPS1Q96D71 796 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 HBEGFQ99075 208 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 MENTQ9BUN1 341 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 EFCAB11Q9BUY7 163 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 C1orf50Q9BV19 199 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SLC25A23Q9BV35 468 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ACPTQ9BZG2 426 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PCBD2Q9H0N5 130 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 LRTM1Q9HBL6 345 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 IMP3Q9NV31 184 aaKnown RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 NOP53Q9NZM5 478 aaKnown RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 ZIM2Q9NZV7 527 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PCOLCE2Q9UKZ9 415 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-223ENST00000552480 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
CACNB3-223ENST00000552480 BBIP1A8MTZ0 92 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 METTL12A8MUP2 240 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 SCAMP1O15126 338 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 KDM1AO60341 852 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 RASSF9O75901 435 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 RASGRP1O95267 797 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 THEGLP0DJG4 465 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 HSD3B1P14060 373 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 SLC2A4P14672 509 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 HSD3B2P26439 372 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 VARSP26640 1264 aaKnown RBP12.27□□□□□ -0.45
CACNB3-223ENST00000552480 CD27P26842 260 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 NDUFS1P28331 727 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 PGM1P36871 562 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 NUDT2P50583 147 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 RPL38P63173 70 aaKnown RBP12.27□□□□□ -0.45
CACNB3-223ENST00000552480 SLC25A3Q00325 362 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 HMGCS1Q01581 520 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 LAPTM5Q13571 262 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 KRT33BQ14525 404 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 C10orf62Q5T681 223 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-223ENST00000552480 THEMIS2Q5TEJ8 643 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 NXPE4Q6UWF7 544 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 SUSD1Q6UWL2 747 aa12.27□□□□□ -0.45
CACNB3-223ENST00000552480 ABRAXAS1Q6UWZ7 409 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms