RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CLPTM1LQ96KA5 538 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 F2RL3Q96RI0 385 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SNX11Q9Y5W9 270 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ARHGEF17Q96PE2 2063 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SPTBN4Q9H254 2564 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CCDC189A1A4V9 331 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 GAPDHSO14556 408 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ERI3O43414 337 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 VEGFDO43915 354 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CCDC22O60826 627 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 NME6O75414 186 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CEACAM5P06731 702 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 KLK1P06870 262 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 COX7A2P14406 83 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AQP1P29972 269 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 GRB7Q14451 532 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ZNF678Q5SXM1 525 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 HMGN2P46Q86SG4 172 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SPATA24Q86W54 205 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PHTF2Q8N3S3 785 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 KCNV2Q8TDN2 545 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ZNF480Q8WV37 535 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 NEIL2Q969S2 332 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PREBQ9HCU5 417 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 NUDT4Q9NZJ9 180 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AURKCQ9UQB9 309 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DNAH14Q0VDD8 3507 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PLRG1O43660 514 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 KDM1AO60341 852 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 MLYCDO95822 493 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 COL6A2P12110 1019 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DDX5P17844 614 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 IL1RNP18510 177 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 EPORP19235 508 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CD9P21926 228 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PGM1P36871 562 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 MAPK10P53779 464 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PNLIPRP1P54315 467 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 HNRNPKP61978 463 aaKnown RBP eCLIP7.92□□□□□ -1.146e-8■■■■■ 27.1
CHPT1-208ENST00000552215 DOC2AQ14183 400 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PTGR1Q14914 329 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ELOCQ15369 112 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 HKDC1Q2TB90 917 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AASDHQ4L235 1098 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 LETMD1Q6P1Q0 360 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CYP20A1Q6UW02 462 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AMIGO1Q86WK6 493 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 GPR150Q8NGU9 434 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CAMK1GQ96NX5 476 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 C1QTNF2Q9BXJ5 285 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 TMEM74BQ9NUR3 256 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SCHIP1Q9P0W5 487 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 LRIT1Q9P2V4 623 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SNX6Q9UNH7 406 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SCN3AQ9NY46 2000 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SPEGQ15772 3267 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ARNTLO00327 626 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 FUCA1P04066 466 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AFF3P51826 1226 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PRKAA2P54646 552 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 ERVPABLB-1P60509 514 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SIGLEC14Q08ET2 396 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 NFYCQ13952 458 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 KCNAB1Q14722 419 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SF3A2Q15428 464 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 TYSND1Q2T9J0 566 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DEFB134Q4QY38 66 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 C1orf146Q5VVC0 180 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 GPR153Q6NV75 609 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 MACC1Q6ZN28 852 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 LONP2Q86WA8 852 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DCUN1D3Q8IWE4 304 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DEFB107AQ8IZN7 70 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CLEC4FQ8N1N0 589 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 C1orf52Q8N6N3 182 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 DDHD1Q8NEL9 900 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SLC37A2Q8TED4 501 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 YIPF4Q9BSR8 244 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 NUSAP1Q9BXS6 441 aaKnown RBP7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CD244Q9BZW8 370 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 SLC32A1Q9H598 525 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 AKTIPQ9H8T0 292 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 CPNE7Q9UBL6 633 aa7.92□□□□□ -1.14
CHPT1-208ENST00000552215 PIKFYVEQ9Y2I7 2098 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 A0A1W2PPC4 97 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 PSMD12O00232 456 aaPredicted RBP7.91□□□□□ -1.14
CHPT1-208ENST00000552215 B4GALT2O60909 372 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 LBPP18428 481 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 IDH3AP50213 366 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 OR1D5P58170 312 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 GPR18Q14330 331 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 ABRAXAS2Q15018 415 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 CLNKQ7Z7G1 428 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 ZNF547Q8IVP9 402 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 KRT78Q8N1N4 520 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 FITM2Q8N6M3 262 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 CCDC138Q96M89 665 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 ARL8BQ9NVJ2 186 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 SPHK1Q9NYA1 384 aa7.91□□□□□ -1.14
CHPT1-208ENST00000552215 ALPK3Q96L96 1907 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms