RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 FOLR1P15328 257 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 ST6GAL1P15907 406 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 OAS2P29728 719 aaKnown RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 PEBP1P30086 187 aaKnown RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 NFATC3Q12968 1075 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 USP10Q14694 798 aaKnown RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 SF1Q15637 639 aaKnown RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 FBXO38Q6PIJ6 1188 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 PPP1R3BQ86XI6 285 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 C2orf73Q8N5S3 287 aaPredicted RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 LRRN4CLQ8ND94 238 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 SMPDL3AQ92484 453 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 TCTN2Q96GX1 697 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 PKP4Q99569 1192 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 CTRCQ99895 268 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 ACSS3Q9H6R3 686 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 PARVBQ9HBI1 364 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 GPAMQ9HCL2 828 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 APMAPQ9HDC9 416 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 FGF21Q9NSA1 209 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 MTO1Q9Y2Z2 717 aaKnown RBP16.71■□□□□ 0.27
CDK4-208ENST00000551706 BOD1L1Q8NFC6 3051 aa16.71■□□□□ 0.27
CDK4-208ENST00000551706 FLNCQ14315 2725 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 K7ENP7 123 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 ACSL3O95573 720 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 SLC16A8O95907 504 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 ENO2P09104 434 aaPredicted RBP16.7■□□□□ 0.26
CDK4-208ENST00000551706 HIST1H2AGP0C0S8 130 aaPredicted RBP16.7■□□□□ 0.26
CDK4-208ENST00000551706 STMN1P16949 149 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 HIST1H2ADP20671 130 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 PNLIPRP1P54315 467 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 KCNAB1Q14722 419 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 NAA25Q14CX7 972 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDK4-208ENST00000551706 INO80CQ6PI98 192 aaPredicted RBP16.7■□□□□ 0.26
CDK4-208ENST00000551706 TRIM73Q86UV7 250 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 TAX1BP1Q86VP1 789 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 C19orf47Q8N9M1 422 aaKnown RBP16.7■□□□□ 0.26
CDK4-208ENST00000551706 LMNTD1Q8N9Z9 388 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 HIST1H2AHQ96KK5 128 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 CCDC138Q96M89 665 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 HIST1H2AJQ99878 128 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 H2AFJQ9BTM1 129 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 TRIM54Q9BYV2 358 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 IGSF5Q9NSI5 407 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.7■□□□□ 0.26
CDK4-208ENST00000551706 SSUH2Q9Y2M2 353 aa16.7■□□□□ 0.26
CDK4-208ENST00000551706 KRT87PA6NCN2 255 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 TERTO14746 1132 aaKnown RBP16.69■□□□□ 0.26
CDK4-208ENST00000551706 PRICKLE3O43900 615 aaPredicted RBP16.69■□□□□ 0.26
CDK4-208ENST00000551706 PVRP15151 417 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 AP1S2P56377 157 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 TRMT10CQ7L0Y3 403 aaKnown RBP16.69■□□□□ 0.26
CDK4-208ENST00000551706 DTX1Q86Y01 620 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 CEP97Q8IW35 865 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 SYTL1Q8IYJ3 562 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 ZNF480Q8WV37 535 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 DLG3Q92796 817 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 ADAMTS6Q9UKP5 1117 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 PDE10AQ9Y233 779 aa16.69■□□□□ 0.26
CDK4-208ENST00000551706 TMEM184BQ9Y519 407 aaPredicted RBP16.69■□□□□ 0.26
CDK4-208ENST00000551706 A0A087WUV0 522 aaPredicted RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 STK17BO94768 372 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 CCNDBP1O95273 360 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 PGGT1BP53609 377 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 RAB10P61026 200 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 FASTKQ14296 549 aaKnown RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 ZNF460Q14592 562 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK4-208ENST00000551706 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 TMEM207Q6UWW9 146 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 ZFAND4Q86XD8 727 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 OR2A1Q8NGT9 310 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK4-208ENST00000551706 N4BP2L2Q92802 583 aaPredicted RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 ZUFSPQ96AP4 578 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 ZNF501Q96CX3 271 aaPredicted RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 ULBP3Q9BZM4 244 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 KLHL25Q9H0H3 589 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 NOVA2Q9UNW9 492 aaKnown RBP16.68■□□□□ 0.26
CDK4-208ENST00000551706 KLK4Q9Y5K2 254 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 IKBKGQ9Y6K9 419 aa16.68■□□□□ 0.26
CDK4-208ENST00000551706 A0A1W2PPV9 198 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 TARM1B6A8C7 271 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 E7ENX8 843 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 FAM155BO75949 473 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 WISP3O95389 354 aaPredicted RBP16.67■□□□□ 0.26
CDK4-208ENST00000551706 SLU7O95391 586 aaKnown RBP16.67■□□□□ 0.26
CDK4-208ENST00000551706 INHBAP08476 426 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 ABHD2P08910 425 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 MAGP20916 626 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 IMPA1P29218 277 aa16.67■□□□□ 0.26
CDK4-208ENST00000551706 CRABP2P29373 138 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms