RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TMEM184BQ9Y519 407 aaPredicted RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF521Q96K83 1311 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 PTPRQQ9UMZ3 2332 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 A0A1B0GVT2 93 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 OR6C75A6NL08 312 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 TRIM77I1YAP6 450 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 SPRY3O43610 288 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 FMO6PO60774 539 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 RBMXL2O75526 392 aaKnown RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 LCATP04180 440 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 FGF2P09038 288 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 AZGP1P25311 298 aaKnown RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 PSMA3P25788 255 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 HOXD3P31249 432 aaPredicted RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 RFX5P48382 616 aaPredicted RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 CLDN20P56880 219 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 COG7P83436 770 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 COASYQ13057 564 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 GAGE2BQ13066 116 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 RABEP1Q15276 862 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 GAGE2EQ4V326 116 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 KRTCAP3Q53RY4 240 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 SLC10A5Q5PT55 438 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 PAPPA-AS1Q5QFB9 102 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF626Q68DY1 528 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 GAGE2AQ6NT46 116 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 BRAT1Q6PJG6 821 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 FAM198BQ6UWH4 519 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 COLCA1Q6ZS62 124 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 OTOAQ7RTW8 1153 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 ZSCAN30Q86W11 494 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 NRROSQ86YC3 692 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 PAPD5Q8NDF8 572 aaKnown RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 ACVR1CQ8NER5 493 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 OR2AK2Q8NG84 335 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 OR2AJ1Q8NGZ0 328 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 MOSPD2Q8NHP6 518 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 ARNTL2Q8WYA1 636 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 EXOC4Q96A65 974 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 INTS14Q96SY0 518 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 GTPBP2Q9BX10 602 aaKnown RBP5.12□□□□□ -1.59
CPSF6-206ENST00000550987 RETREG1Q9H6L5 497 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 NOX4Q9NPH5 578 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 ANKMY1Q9P2S6 941 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 GAGE2DQ9UEU5 116 aa5.12□□□□□ -1.59
CPSF6-206ENST00000550987 A4D1N5 150 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 CCDC188H7C350 402 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 CLDN4O14493 209 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 TO15178 435 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 CLIC2O15247 247 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 MED24O75448 989 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SOX30O94993 753 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 TMEM191BP0C7N4 346 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SOAT1P35610 550 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 AMTP48728 403 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 LIMK1P53667 647 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 TUBB4BP68371 445 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 ROR2Q01974 943 aaKnown RBP5.11□□□□□ -1.59
CPSF6-206ENST00000550987 GPS2Q13227 327 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 RCN2Q14257 317 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 KLHL26Q53HC5 615 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 ZRANB3Q5FWF4 1079 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 GCNT6Q5T4J0 391 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SHEQ5VZ18 495 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 FAM91A1Q658Y4 838 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 DBX2Q6ZNG2 339 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 C1orf52Q8N6N3 182 aaKnown RBP5.11□□□□□ -1.59
CPSF6-206ENST00000550987 DENND1AQ8TEH3 1009 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SLC44A1Q8WWI5 657 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 CCDC47Q96A33 483 aaKnown RBP5.11□□□□□ -1.59
CPSF6-206ENST00000550987 COG3Q96JB2 828 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 CSF3RQ99062 836 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SLC25A33Q9BSK2 321 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 C16orf70Q9BSU1 422 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SCAND2PQ9GZW5 306 aaPredicted RBP5.11□□□□□ -1.59
CPSF6-206ENST00000550987 RBM38Q9H0Z9 239 aaKnown RBP5.11□□□□□ -1.59
CPSF6-206ENST00000550987 ABCB8Q9NUT2 735 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 ADPRHL2Q9NX46 363 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SEPT10Q9P0V9 454 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 POLLQ9UGP5 575 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 PADI2Q9Y2J8 665 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 GRIP1Q9Y3R0 1128 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.11□□□□□ -1.593e-12■■■□□ 16.2
CPSF6-206ENST00000550987 INSL5Q9Y5Q6 135 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 PTGDR2Q9Y5Y4 395 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 SCN9AQ15858 1988 aa5.11□□□□□ -1.59
CPSF6-206ENST00000550987 ATRQ13535 2644 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 A0A1W2PPM1 405 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 LRRD1A4D1F6 860 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 HEPACAM2A8MVW5 462 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 NCANO14594 1321 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 IFIT3O14879 490 aaKnown RBP5.1□□□□□ -1.59
CPSF6-206ENST00000550987 RGS14O43566 566 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 BMP10O95393 424 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 PTPRCP08575 1304 aa5.1□□□□□ -1.59
CPSF6-206ENST00000550987 FAM58BPP0C7Q3 252 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms