RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 COL8A1P27658 744 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 DCTP40126 519 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF75DP51815 510 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 VSX2P58304 361 aaPredicted RBP22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF169Q14929 603 aaPredicted RBP22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 PCID2Q5JVF3 399 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 WASHC2DQ5SRD0 308 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF787Q6DD87 383 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 KIRREL2Q6UWL6 708 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ISLR2Q6UXK2 745 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 KCNMB4Q86W47 210 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 SLC34A3Q8N130 599 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 MPP5Q8N3R9 675 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 LMNTD1Q8N9Z9 388 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 HES6Q96HZ4 224 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 LMF1Q96S06 567 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 CRB3Q9BUF7 120 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 MENTQ9BUN1 341 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ENAMQ9NRM1 1142 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 PAK5Q9P286 719 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF282Q9UDV7 671 aaPredicted RBP22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 CIDEBQ9UHD4 219 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 TTC7AQ9ULT0 858 aaPredicted RBP22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 DOPEY1Q5JWR5 2465 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 POLEQ07864 2286 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 NBPF19A0A087WUL8 3843 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 HYKKA2RU49 373 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 LIASO43766 372 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 ERVK-10P10266 1014 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 EDN3P14138 238 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 OR1D4P47884 311 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF534Q76KX8 674 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 KRT222Q8N1A0 295 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 FAR1Q8WVX9 515 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 ATG4AQ8WYN0 398 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 MIEF2Q96C03 454 aa22.08■■□□□ 1.13
SMARCD1-209ENST00000550477 TCRBV7S2A1N4TA0A589 114 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 MAP2K7O14733 419 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 MCM3P25205 808 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 GRB7Q14451 532 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 MUM1Q2TAK8 710 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 FAM180AQ6UWF9 173 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 C4orf22Q6V702 233 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 SHISA6Q6ZSJ9 500 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 OR11G2Q8NGC1 345 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 GRHL3Q8TE85 626 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 ZNF778Q96MU6 729 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 ZNF285Q96NJ3 590 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 CHRAC1Q9NRG0 131 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 UTP6Q9NYH9 597 aaKnown RBP22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 BFARQ9NZS9 450 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 ZC3H7BQ9UGR2 993 aaKnown RBP22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 CDC14AQ9UNH5 594 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 MAU2Q9Y6X3 613 aa22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 DIDO1Q9BTC0 2240 aaKnown RBP22.07■■□□□ 1.12
SMARCD1-209ENST00000550477 A0A0J9YVX5 310 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 DYTNA2CJ06 578 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 VSTM2BA6NLU5 285 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 PRPF4O43172 522 aaKnown RBP eCLIP22.06■■□□□ 1.122e-8■■■■■ 35.8
SMARCD1-209ENST00000550477 ALOX12BO75342 701 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 HPP00738 406 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 ACPPP15309 386 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 CXCR2P25025 360 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 GRIA1P42261 906 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 SEMA3AQ14563 771 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 OASLQ15646 514 aaKnown RBP22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 COX15Q7KZN9 410 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 SDCCAG8Q86SQ7 713 aaPredicted RBP22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 RNF10Q8N5U6 811 aaKnown RBP22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 OTUD6BQ8N6M0 293 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 HMGCLL1Q8TB92 370 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 LKAAEAR1Q8TD35 194 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 MIPEPQ99797 713 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 IL22Q9GZX6 179 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 CTSFQ9UBX1 484 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 NTNG1Q9Y2I2 539 aa22.06■■□□□ 1.12
SMARCD1-209ENST00000550477 SVILO95425 2214 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 LRRTM2O43300 516 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 VPS26AO75436 327 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 C1orf105O95561 183 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 EIF2S1P05198 315 aaKnown RBP22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 UQCRHP07919 91 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 FDXRP22570 491 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 RPS3P23396 243 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 CMPK1P30085 196 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 RPUSD3Q6P087 351 aaKnown RBP22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 LDB1Q86U70 411 aaPredicted RBP22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 ZGRF1Q86YA3 2104 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 KBTBD2Q8IY47 623 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 METTL27Q8N6F8 245 aaPredicted RBP22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 BCORP1Q8N888 145 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 OR2L3Q8NG85 312 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 STT3BQ8TCJ2 826 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 SPATA7Q9P0W8 599 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 OSGIN2Q9Y236 505 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 KLK4Q9Y5K2 254 aa22.05■■□□□ 1.12
SMARCD1-209ENST00000550477 A0A1B0GUH1 482 aa22.04■■□□□ 1.12
SMARCD1-209ENST00000550477 H3BMM5 538 aa22.04■■□□□ 1.12
SMARCD1-209ENST00000550477 PRICKLE3O43900 615 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms