RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 MAD1L1Q9Y6D9 718 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 A0A0J9YVX5 310 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ZCWPW2A0A1B0GU75 182 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ARHGEF33A8MVX0 844 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 TARM1B6A8C7 271 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 PEX12O00623 359 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 DSCR3O14972 297 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 KIF5CO60282 957 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 USP1O94782 785 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ITGAXP20702 1163 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 VSX2P58304 361 aaPredicted RBP15.65■□□□□ 0.1
VPS29-207ENST00000549970 GRM7Q14831 915 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 CYP2A13Q16696 494 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ATCAYQ86WG3 371 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 SPNS2Q8IVW8 549 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 AGGF1Q8N302 714 aaeCLIP15.65■□□□□ 0.1
VPS29-207ENST00000549970 METTL27Q8N6F8 245 aaPredicted RBP15.65■□□□□ 0.1
VPS29-207ENST00000549970 OR2A1Q8NGT9 310 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 OR9A1PQ8NGU1 263 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ACTRT1Q8TDG2 376 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 GRK7Q8WTQ7 553 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 FER1L6-AS2Q96M78 137 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 SLC30A3Q99726 388 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 ACAT2Q9BWD1 397 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 MFRPQ9BY79 579 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 CCDC68Q9H2F9 335 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 P4HTMQ9NXG6 502 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 PCDHGB7Q9Y5F8 929 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 FAM169AQ9Y6X4 670 aa15.65■□□□□ 0.1
VPS29-207ENST00000549970 HECTD1Q9ULT8 2610 aa15.64■□□□□ 0.1
VPS29-207ENST00000549970 DOPEY2Q9Y3R5 2298 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 MASP2O00187 686 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 DPM1O60762 260 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 PSIP1O75475 530 aaKnown RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 UMODP07911 640 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 CMPK1P30085 196 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 SLC1A2P43004 574 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 MAGEA3P43357 314 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 FNTAP49354 379 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 CLCN7P51798 805 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 YBX1P67809 324 aaKnown RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 CUL1Q13616 776 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 TSTA3Q13630 321 aaPredicted RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 PCM1Q15154 2024 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 PPP1R7Q15435 360 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 TTLL9Q3SXZ7 439 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 DCAF10Q5QP82 559 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 YOD1Q5VVQ6 348 aaPredicted RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 FRMPD2BQ6IN97 320 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 SUSD1Q6UWL2 747 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 PPP1R32Q7Z5V6 425 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 DTWD1Q8N5C7 304 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 NAT8LQ8N9F0 302 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 CLEC1AQ8NC01 280 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 CPT1CQ8TCG5 803 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 ZNF285Q96NJ3 590 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 GRPEL1Q9HAV7 217 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 C20orf96Q9NUD7 363 aaPredicted RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 TRMT1Q9NXH9 659 aaKnown RBP15.64■□□□□ 0.09
VPS29-207ENST00000549970 LUZP4Q9P127 313 aa15.64■□□□□ 0.09
VPS29-207ENST00000549970 FLNCQ14315 2725 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 MYO1CO00159 1063 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 ZSCAN12O43309 604 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 SRPX2O60687 465 aaPredicted RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 CATP04040 527 aaKnown RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 EIF2S1P05198 315 aaKnown RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 ERGP11308 486 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 PIM1P11309 404 aaPredicted RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 OR1D4P47884 311 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 CD97P48960 835 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 MPP1Q00013 466 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 LONRF1Q17RB8 773 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 WASHC2DQ5SRD0 308 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 ZNF549Q6P9A3 640 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 COX15Q7KZN9 410 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 OVCH1Q7RTY7 1134 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 PPIL6Q8IXY8 311 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 EFCAB3Q8N7B9 438 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 GIMAP7Q8NHV1 300 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 FKBP10Q96AY3 582 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 SIGLEC10Q96LC7 697 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 PKP4Q99569 1192 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 SMAD5Q99717 465 aaKnown RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 DPH7Q9BTV6 452 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 SLC6A20Q9NP91 592 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 ZC3H7BQ9UGR2 993 aaKnown RBP15.63■□□□□ 0.09
VPS29-207ENST00000549970 SNX12Q9UMY4 172 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 KLK4Q9Y5K2 254 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 MAU2Q9Y6X3 613 aa15.63■□□□□ 0.09
VPS29-207ENST00000549970 LOC105369274A0A096LPK9 316 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 LOC102723532A0A0G2JNH3 316 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 FITM1A5D6W6 292 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 SORBS2O94875 1100 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 MED26O95402 600 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 SYF2O95926 243 aaKnown RBP15.62■□□□□ 0.09
VPS29-207ENST00000549970 IGHEP01854 428 aa15.62■□□□□ 0.09
VPS29-207ENST00000549970 RPA3P35244 121 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms