RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CCL26Q9Y258 94 aa4.74□□□□□ -1.65
SCAF11-212ENST00000549162 MYO1GB0I1T2 1018 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GOLGA8RI6L899 631 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CBX4O00257 560 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 OR7A17O14581 309 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 WNT9AO14904 365 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 HGSO14964 777 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GOT2P00505 430 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 FGF5P12034 268 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GGCXP38435 758 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TRPC1P48995 793 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 HMGA2P52926 109 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GPLD1P80108 840 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 POU4F2Q12837 409 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF648Q5T619 568 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LRFN4Q6PJG9 635 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 METTL4Q8N3J2 472 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ARL14EPQ8N8R7 260 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LSM14AQ8ND56 463 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RBM15BQ8NDT2 890 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ADPRHL1Q8NDY3 354 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 PPP1R35Q8TAP8 253 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 PROKR1Q8TCW9 393 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 HSPH1Q92598 858 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CHMP6Q96FZ7 201 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 WBP1Q96G27 269 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 EFCAB11Q9BUY7 163 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 KLHL25Q9H0H3 589 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 OR10A4Q9H209 315 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 BRD9Q9H8M2 597 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM181Q9P2C4 612 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 KCND3Q9UK17 655 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 INVSQ9Y283 1065 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 NAALAD2Q9Y3Q0 740 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 PKP3Q9Y446 797 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 A0A1W2PQD3 144 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CCDC162PA2VCL2 907 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GMNCA6NCL1 334 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 FAM220BPB1ANY3 271 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 H0YIG0 161 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RNASET2O00584 256 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 UGT1A9O60656 530 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 HPRP00739 348 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SHBGP04278 402 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GABRG2P18507 467 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TFEBP19484 476 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GPX3P22352 226 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 NMBRP28336 390 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LSP1P33241 339 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GPC1P35052 558 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 PRIM2P49643 509 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 EEFSECP57772 596 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SHC2P98077 582 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CDK3Q00526 305 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RBBP4Q09028 425 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 EFEMP1Q12805 493 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TMED1Q13445 227 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 FGL2Q14314 439 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SQLEQ14534 574 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GEN1Q17RS7 908 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ANKDD1AQ495B1 522 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 IQCCQ4KMZ1 466 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SERPINA11Q86U17 422 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 UHMK1Q8TAS1 419 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 PYROXD1Q8WU10 500 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 REPS1Q96D71 796 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GIMAP5Q96F15 307 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TRIM54Q9BYV2 358 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GLYATL1P3A0A0U1RQE8 302 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CXorf49A8MYA2 514 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SOX1O00570 391 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 DTNBO60941 627 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CEACAM4O75871 244 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 DCTN3O75935 186 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 UMPSP11172 480 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 DRD2P14416 443 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CSRP1P21291 193 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 RGS7P49802 495 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 SCAND1P57086 179 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ABCE1P61221 599 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 MLLT1Q03111 559 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 AP1B1Q10567 949 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LCP2Q13094 533 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 DYNC1I2Q13409 638 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 VEZF1Q14119 521 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 FAM53BQ14153 422 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM44Q2T9K0 475 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 INTS11Q5TA45 600 aaKnown RBP4.73□□□□□ -1.65
SCAF11-212ENST00000549162 LAIR1Q6GTX8 287 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 THSD4Q6ZMP0 1018 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 GSTA5Q7RTV2 222 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF605Q86T29 641 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 KIF18BQ86Y91 864 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 CYP4X1Q8N118 509 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM130Q8N3G9 435 aa4.73□□□□□ -1.65
SCAF11-212ENST00000549162 ZBTB2Q8N680 514 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms