RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 TOP3AQ13472 1001 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PDE12Q6L8Q7 609 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 NIPAL1Q6NVV3 410 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 TTC29Q8NA56 475 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 HERC2P3Q9BVR0 1158 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 EPS8L2Q9H6S3 715 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 MAGEE1Q9HCI5 957 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 SERHLQ9NQF3 203 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 USE1Q9NZ43 259 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 H7C4K7 107 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 UGT2B11O75310 529 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ERN1O75460 977 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 LCKP06239 509 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 SDC1P18827 310 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PCMT1P22061 227 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 CA8P35219 290 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLK3P49761 638 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 GPRC6AQ5T6X5 926 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 OR2T5Q6IEZ7 315 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 UTS2BQ765I0 119 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PAGE2Q7Z2X7 111 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLECL1Q8IZS7 167 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 OR2T29Q8NH02 315 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 MTERF1Q99551 399 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 REXO4Q9GZR2 422 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 IGHA2P01877 340 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 RETP07949 1114 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ENGP17813 658 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ITIH1P19827 911 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 CD9P21926 228 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 GABARAPL2P60520 117 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 VLDLRP98155 873 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 TSTA3Q13630 321 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PTCHD3Q3KNS1 767 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 TTLL9Q3SXZ7 439 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ATG9BQ674R7 924 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 RNF180Q86T96 592 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 SYT12Q8IV01 421 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 GPR26Q8NDV2 337 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PSMA8Q8TAA3 256 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PLD4Q96BZ4 506 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 REXO5Q96IC2 774 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 ALPK1Q96QP1 1244 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 CDK5RAP1Q96SZ6 601 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 TPRKBQ9Y3C4 175 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
RAPGEF3-219ENST00000549151 FAM220BPB1ANY3 271 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLIC1O00299 241 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 FPGTO14772 594 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 INPPL1O15357 1258 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 KDM1AO60341 852 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 FZD6O60353 706 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRBC1P01850 177 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 KIR3DL1P43629 444 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 NRIP1P48552 1158 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 MASP1P48740 699 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 IFITM3Q01628 133 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TXNDC8Q6A555 127 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CHST9Q7L1S5 443 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRIM46Q7Z4K8 759 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ANKRD13BQ86YJ7 626 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 PLD3Q8IV08 490 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CASD1Q96PB1 797 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRPS1Q9UHF7 1281 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZNF229Q9UJW7 825 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLEC4EQ9ULY5 219 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 NPIPB15A6NHN6 443 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TUFMP49411 452 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TMED10P49755 219 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 STK19P49842 368 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CAP1Q01518 475 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLCA4Q14CN2 919 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ATP13A5Q4VNC0 1218 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 FAM26DQ5JW98 314 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZSWIM9Q86XI8 627 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 NXPE1Q8N323 547 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 HPS1Q92902 700 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZNF641Q96N77 438 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRIT1Q9H3H1 467 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 TMEM45AQ9NWC5 275 aa11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-219ENST00000549151 A0A096LPI6 279 aa11.59□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRIM43BA6NCK2 446 aa11.59□□□□□ -0.55
RAPGEF3-219ENST00000549151 NUDT7P0C024 238 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms