RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 COL4A6Q14031 1691 aa3.39□□□□□ -1.87
CNOT2-216ENST00000548939 GVINP1Q7Z2Y8 2422 aa3.39□□□□□ -1.87
CNOT2-216ENST00000548939 MAST4O15021 2626 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 PAGE4O60829 102 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 GCNT3O95395 438 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 HSD3B1P14060 373 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 ABCD3P28288 659 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 TAS2R40P59535 323 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 IRX3P78415 501 aaPredicted RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 TCP10Q12799 353 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 P2RY6Q15077 328 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 CCNG2Q16589 344 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 GLIPR1L2Q4G1C9 344 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 SLC9C2Q5TAH2 1124 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 CYP4A22Q5TCH4 519 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 PSRC1Q6PGN9 363 aaPredicted RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 CYP26C1Q6V0L0 522 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 SEPT14Q6ZU15 432 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 DENND5BQ6ZUT9 1274 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 CRYBG2Q8N1P7 616 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 LINC00612Q8N6U2 182 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 KCNG4Q8TDN1 519 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 SMARCE1Q969G3 411 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 RMDN1Q96DB5 314 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 OMA1Q96E52 524 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 RPS6KC1Q96S38 1066 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 UPF3BQ9BZI7 483 aaKnown RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 ANKRD2Q9GZV1 360 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 UBE2ZQ9H832 354 aaPredicted RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 EPB41L5Q9HCM4 733 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 OLFML3Q9NRN5 406 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 LRWD1Q9UFC0 647 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 LIMA1Q9UHB6 759 aaKnown RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 MUTYHQ9UIF7 546 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 AGTPBP1Q9UPW5 1226 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 R3HDM2Q9Y2K5 976 aaKnown RBP3.38□□□□□ -1.87
CNOT2-216ENST00000548939 A0A0G2JMZ2 1700 aa3.38□□□□□ -1.87
CNOT2-216ENST00000548939 EP300Q09472 2414 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 TMEM221A6NGB7 291 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 EPOPA6NHQ4 379 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 H3BQ06 376 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 M0R296 226 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 ZNF217O75362 1048 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 DAB1O75553 588 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 TIMP1P01033 207 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 CA3P07451 260 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 MAPK4P31152 587 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 HARS2P49590 506 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 RPS18P62269 152 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 OLR1P78380 273 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 CDR2Q01850 454 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 PEX6Q13608 980 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 RAPSNQ13702 412 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 MVPQ14764 893 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 ADIPOQQ15848 244 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 SGSM1Q2NKQ1 1148 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 LRIF1Q5T3J3 769 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 INO80CQ6PI98 192 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 RSRC2Q7L4I2 434 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 LRRTM1Q86UE6 522 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 SCYL3Q8IZE3 742 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 L3MBTL4Q8NA19 623 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 GPRC5AQ8NFJ5 357 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 OR8K5Q8NH50 307 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 TEKT1Q969V4 418 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 GFI1Q99684 422 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 SEPT5Q99719 369 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 PIP5K1AQ99755 562 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 GPATCH1Q9BRR8 931 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 SCPEP1Q9HB40 452 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 FLRT3Q9NZU0 649 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 TSPYL4Q9UJ04 414 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 LRRFIP2Q9Y608 721 aaKnown RBP3.37□□□□□ -1.87
CNOT2-216ENST00000548939 VPS13AQ96RL7 3174 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 KDM3AQ9Y4C1 1321 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 SPEF2Q9C093 1822 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 USP24Q9UPU5 2620 aa3.37□□□□□ -1.87
CNOT2-216ENST00000548939 DMXL1Q9Y485 3027 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 ARAP2Q8WZ64 1704 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 TMEM189-UBE2V1I3L0A0 370 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 J3QR06 171 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 HOXC11O43248 304 aaPredicted RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 FRAT2O75474 233 aaPredicted RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 SEC14L2O76054 403 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 IPO7O95373 1038 aaKnown RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 H1F0P07305 194 aaKnown RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 EPHA8P29322 1005 aaPredicted RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 NKX2-1P43699 371 aaPredicted RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 HMGCS2P54868 508 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 VCPP55072 806 aaKnown RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 FKBP1AP62942 108 aaKnown RBP3.36□□□□□ -1.87
CNOT2-216ENST00000548939 MS4A2Q01362 244 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 GPR17Q13304 367 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 UBE2V1Q13404 147 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 BIRC2Q13490 618 aa3.36□□□□□ -1.87
CNOT2-216ENST00000548939 SOWAHCQ53LP3 525 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms